RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ADAMTS4O75173 837 aa24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 TIMP1P01033 207 aa24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 COL9A1P20849 921 aa24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 ACLYP53396 1101 aa24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 RPS6P62753 249 aaKnown RBP24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 SSRP1Q08945 709 aaKnown RBP24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 RNF207Q6ZRF8 634 aa24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 ZSCAN31Q96LW9 406 aaPredicted RBP24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 AIFM3Q96NN9 605 aa24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 COL20A1Q9P218 1284 aa24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 SOWAHBA6NEL2 793 aa24.71■■□□□ 1.55
R3HDM4-206ENST00000590454 MOXD2PA6NHM9 499 aa24.71■■□□□ 1.55
R3HDM4-206ENST00000590454 SCG2P13521 617 aa24.71■■□□□ 1.55
R3HDM4-206ENST00000590454 CALML3P27482 149 aa24.71■■□□□ 1.55
R3HDM4-206ENST00000590454 FAM133AQ8N9E0 248 aa24.71■■□□□ 1.55
R3HDM4-206ENST00000590454 NSUN7Q8NE18 718 aaKnown RBP24.71■■□□□ 1.55
R3HDM4-206ENST00000590454 TMX3Q96JJ7 454 aa24.71■■□□□ 1.55
R3HDM4-206ENST00000590454 CFBP00751 764 aa24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 HOXA13P31271 388 aaPredicted RBP24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 CPLX2Q6PUV4 134 aaKnown RBP24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 MSL3Q8N5Y2 521 aaKnown RBP24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 RGS22Q8NE09 1264 aa24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 GAS2L1Q99501 681 aaPredicted RBP24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.7■■□□□ 1.542e-7■■□□□ 14.4
R3HDM4-206ENST00000590454 SH2B1Q9NRF2 756 aaPredicted RBP24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 BARHL2Q9NY43 387 aa24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 PRUNE2Q8WUY3 3088 aa24.7■■□□□ 1.54
R3HDM4-206ENST00000590454 CDH23Q9H251 3354 aa24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 ADAMTS3O15072 1205 aa24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 FDPSP14324 419 aaKnown RBP24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 HSD17B4P51659 736 aa24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 AKAP17AQ02040 695 aaKnown RBP24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 MFSD5Q6N075 450 aa24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 KLHDC9Q8NEP7 349 aa24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 SYTL5Q8TDW5 730 aaPredicted RBP24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 ATXN2LQ8WWM7 1075 aaKnown RBP24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 LENG1Q96BZ8 264 aaPredicted RBP24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 FAM184BQ9ULE4 1060 aa24.69■■□□□ 1.54
R3HDM4-206ENST00000590454 NAPAP54920 295 aa24.68■■□□□ 1.54
R3HDM4-206ENST00000590454 GHRHRQ02643 423 aa24.68■■□□□ 1.54
R3HDM4-206ENST00000590454 TRAF1Q13077 416 aa24.68■■□□□ 1.54
R3HDM4-206ENST00000590454 PPIGQ13427 754 aaKnown RBP eCLIP24.68■■□□□ 1.541e-6■■□□□ 14.5
R3HDM4-206ENST00000590454 KCNA10Q16322 511 aa24.68■■□□□ 1.54
R3HDM4-206ENST00000590454 USP17L6PQ6QN14 398 aa24.68■■□□□ 1.54
R3HDM4-206ENST00000590454 MCF2L2Q86YR7 1114 aa24.68■■□□□ 1.54
R3HDM4-206ENST00000590454 TRIM22Q8IYM9 498 aa24.68■■□□□ 1.54
R3HDM4-206ENST00000590454 TBX21Q9UL17 535 aa24.68■■□□□ 1.54
R3HDM4-206ENST00000590454 MROH7Q68CQ1 1323 aa24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 SYNRGQ9UMZ2 1314 aa24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 CDKL5O76039 1030 aa24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 IL27Q8NEV9 243 aa24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 PPM1EQ8WY54 764 aa24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 TAAR1Q96RJ0 339 aa24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 GJB4Q9NTQ9 266 aa24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 VPS54Q9P1Q0 977 aa24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 ORC3Q9UBD5 711 aaPredicted RBP24.67■■□□□ 1.54
R3HDM4-206ENST00000590454 ELP1O95163 1332 aa24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 STK36Q9NRP7 1315 aa24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 MEIS2O14770 477 aa24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 DEXIO95424 95 aa24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 UBE2SQ16763 222 aa24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 CCSAPQ6IQ19 270 aaPredicted RBP24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 GLT1D1Q96MS3 346 aa24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 PBX4Q9BYU1 374 aa24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 PSTPIP2Q9H939 334 aa24.66■■□□□ 1.54
R3HDM4-206ENST00000590454 MCM3APO60318 1980 aa24.65■■□□□ 1.54
R3HDM4-206ENST00000590454 SYNGAP1Q96PV0 1343 aa24.65■■□□□ 1.54
R3HDM4-206ENST00000590454 GCOM1H8Y6P7 765 aaPredicted RBP24.65■■□□□ 1.54
R3HDM4-206ENST00000590454 POLR2MP0CAP2 368 aa24.65■■□□□ 1.54
R3HDM4-206ENST00000590454 MCM2P49736 904 aa24.65■■□□□ 1.54
R3HDM4-206ENST00000590454 TMEM240Q5SV17 173 aa24.65■■□□□ 1.54
R3HDM4-206ENST00000590454 SMCO2A6NFE2 343 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 hCG_1984214I3L0E3 225 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 DUSP11O75319 330 aaKnown RBP24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 SNAI1O95863 264 aaPredicted RBP24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 PBX2P40425 430 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 CDK7P50613 346 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 RASIP1Q5U651 963 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 PPP1R18Q6NYC8 613 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 MAMDC4Q6UXC1 1216 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 C16orf59Q7L2K0 433 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 FCHSD1Q86WN1 690 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 TMEM199Q8N511 208 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 ZNF713Q8N859 430 aaPredicted RBP24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 PCSK9Q8NBP7 692 aaKnown RBP24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 SMARCC2Q8TAQ2 1214 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 ASB2Q96Q27 587 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 THEGQ9P2T0 379 aa24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 ZHX1Q9UKY1 873 aaPredicted RBP24.64■■□□□ 1.54
R3HDM4-206ENST00000590454 GRXCR1A8MXD5 290 aa24.63■■□□□ 1.53
R3HDM4-206ENST00000590454 CST5P28325 142 aaPredicted RBP24.63■■□□□ 1.53
R3HDM4-206ENST00000590454 ALDH5A1P51649 535 aaPredicted RBP24.63■■□□□ 1.53
R3HDM4-206ENST00000590454 VTI1AQ96AJ9 217 aa24.63■■□□□ 1.53
R3HDM4-206ENST00000590454 PRDM12Q9H4Q4 367 aa24.63■■□□□ 1.53
R3HDM4-206ENST00000590454 SPC25Q9HBM1 224 aa24.63■■□□□ 1.53
R3HDM4-206ENST00000590454 RIC8AQ9NPQ8 531 aa24.63■■□□□ 1.53
R3HDM4-206ENST00000590454 CSF2RAP15509 400 aa24.62■■□□□ 1.53
R3HDM4-206ENST00000590454 FOSBP53539 338 aa24.62■■□□□ 1.53
R3HDM4-206ENST00000590454 PSRC1Q6PGN9 363 aaPredicted RBP24.62■■□□□ 1.53
R3HDM4-206ENST00000590454 ARMCX2Q7L311 632 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms