RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 GUCY1A2P33402 732 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 TRAPPC10P48553 1259 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 GTF2A2P52657 109 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 RAB15P59190 212 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 SPP2Q13103 211 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 VGLL4Q14135 290 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 COG2Q14746 738 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 TKFCQ3LXA3 575 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 SYDE2Q5VT97 1194 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 MCF2L2Q86YR7 1114 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 LRRC47Q8N1G4 583 aaKnown RBP8.4□□□□□ -1.06
SMAD4-210ENST00000590061 ZNF396Q96N95 335 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-210ENST00000590061 AMNQ9BXJ7 453 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 GLIS2Q9BZE0 524 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-210ENST00000590061 SCAND2PQ9GZW5 306 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-210ENST00000590061 NCOA5Q9HCD5 579 aaKnown RBP8.4□□□□□ -1.06
SMAD4-210ENST00000590061 BARHL2Q9NY43 387 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 NOL7Q9UMY1 257 aaKnown RBP8.4□□□□□ -1.06
SMAD4-210ENST00000590061 CEP131Q9UPN4 1083 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 RABGAP1Q9Y3P9 1069 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 AFG3L2Q9Y4W6 797 aa8.4□□□□□ -1.06
SMAD4-210ENST00000590061 PAPPA2Q9BXP8 1791 aa8.4□□□□□ -1.07
SMAD4-210ENST00000590061 DOCK1Q14185 1865 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 VPS37CA5D8V6 355 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 TMEM232C9JQI7 657 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 PPFIA3O75145 1194 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 CELF2O95319 508 aaKnown RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 BRD1O95696 1058 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 FOSP01100 380 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 CDC27P30260 824 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 HOXA7P31268 230 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 INPP5BP32019 993 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 DDIT3P35638 169 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 CTSOP43234 321 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 NLRP5P59047 1200 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 ORC2Q13416 577 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 MAP1SQ66K74 1059 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 CLEC17AQ6ZS10 378 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 NBPF11Q86T75 865 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 CCDC144CPQ8IYA2 1237 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 SRBD1Q8N5C6 995 aaKnown RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 JMYQ8N9B5 988 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 CUL5Q93034 780 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 ZKSCAN4Q969J2 545 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 DDX11Q96FC9 970 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 SLF1Q9BQI6 1058 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 TANGO6Q9C0B7 1094 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 KCNH4Q9UQ05 1017 aa8.39□□□□□ -1.07
SMAD4-210ENST00000590061 MRPL11Q9Y3B7 192 aaKnown RBP8.39□□□□□ -1.07
SMAD4-210ENST00000590061 SIPA1L1O43166 1804 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 ABCB11O95342 1321 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 B4DLN1 442 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 LARGE1O95461 756 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 CTDNEP1O95476 244 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 KRT2P35908 639 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 KRT85P78386 507 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 IRX3P78415 501 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-210ENST00000590061 RELBQ01201 579 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.38□□□□□ -1.07
SMAD4-210ENST00000590061 RILPL1Q5EBL4 403 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 FOXD4L5Q5VV16 416 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-210ENST00000590061 MCTP1Q6DN14 999 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 FBXO11Q86XK2 927 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 SIAH1Q8IUQ4 282 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 ADGRF4Q8IZF3 695 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 DNAJC5GQ8N7S2 189 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 MTMR8Q96EF0 704 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 INSM2Q96T92 566 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-210ENST00000590061 MPHOSPH6Q99547 160 aaKnown RBP8.38□□□□□ -1.07
SMAD4-210ENST00000590061 MYL10Q9BUA6 226 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 NMRK2Q9NPI5 230 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 FBXO40Q9UH90 709 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 SNCAIPQ9Y6H5 919 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 MYH6P13533 1939 aa8.38□□□□□ -1.07
SMAD4-210ENST00000590061 CNTNAP5Q8WYK1 1306 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 BAZ2BQ9UIF8 2168 aaKnown RBP8.37□□□□□ -1.07
SMAD4-210ENST00000590061 A0A0G2JLL6 359 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-210ENST00000590061 A0A1W2PRG0 241 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 MANSC4A6NHS7 340 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-210ENST00000590061 TRIM75PA6NK02 468 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 ATP2A1O14983 1001 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 JAK2O60674 1132 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 FLOT1O75955 427 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 F13A1P00488 732 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 MMP1P03956 469 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 RXRAP19793 462 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 U2AF2P26368 475 aaKnown RBP eCLIP8.37□□□□□ -1.072e-6■■■□□ 17.2
SMAD4-210ENST00000590061 GCLCP48506 637 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-210ENST00000590061 ADCY7P51828 1080 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 NAPAP54920 295 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 CCNA1P78396 465 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 PDE4CQ08493 712 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 SREBF2Q12772 1141 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-210ENST00000590061 KRT25Q7Z3Z0 450 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 HEATR3Q7Z4Q2 680 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 PRRT2Q7Z6L0 340 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-210ENST00000590061 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms