RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 SLC52A2Q9HAB3 445 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 DISC1Q9NRI5 854 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 FAM86C1Q9NVL1 165 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 ZBTB1Q9Y2K1 713 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 ANKRD31Q8N7Z5 1873 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 SIPA1L3O60292 1781 aaPredicted RBP9.8□□□□□ -0.84
ATG4D-210ENST00000588972 ANKRD34BA5PLL1 514 aa9.79□□□□□ -0.84
ATG4D-210ENST00000588972 ANP32CO43423 234 aa9.79□□□□□ -0.84
ATG4D-210ENST00000588972 TP53P04637 393 aaPredicted RBP9.79□□□□□ -0.84
ATG4D-210ENST00000588972 SERPINB2P05120 415 aa9.79□□□□□ -0.84
ATG4D-210ENST00000588972 NKG7Q16617 165 aa9.79□□□□□ -0.84
ATG4D-210ENST00000588972 TDRD10Q5VZ19 366 aaKnown RBP9.79□□□□□ -0.84
ATG4D-210ENST00000588972 RNF214Q8ND24 703 aa9.79□□□□□ -0.84
ATG4D-210ENST00000588972 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
ATG4D-210ENST00000588972 LGR6Q9HBX8 967 aa9.79□□□□□ -0.84
ATG4D-210ENST00000588972 NCOA5Q9HCD5 579 aaKnown RBP9.79□□□□□ -0.84
ATG4D-210ENST00000588972 ARFGEF2Q9Y6D5 1785 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 CNTNAP1P78357 1384 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 A0A087X0B3 334 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 C9IYK1 514 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 IRS4O14654 1257 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-210ENST00000588972 NAT2P11245 290 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 MYCLP1P12525 358 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-210ENST00000588972 POU3F3P20264 500 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-210ENST00000588972 KRT76Q01546 638 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 FAM209AQ5JX71 171 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 JAMLQ86YT9 394 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 CCDC74BQ96LY2 380 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 HAUS7Q99871 368 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 DPH2Q9BQC3 489 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-210ENST00000588972 TMPRSS13Q9BYE2 586 aa9.78□□□□□ -0.84
ATG4D-210ENST00000588972 FAM126AQ9BYI3 521 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-210ENST00000588972 PLD2O14939 933 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 S100BP04271 92 aaPredicted RBP9.77□□□□□ -0.85
ATG4D-210ENST00000588972 EPHX1P07099 455 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 NEFMP07197 916 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 CNGA1P29973 690 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 PDE6BP35913 854 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 STAT3P40763 770 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 WDR43Q15061 677 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATG4D-210ENST00000588972 CCDC146Q8IYE0 955 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 PRPF38AQ8NAV1 312 aaKnown RBP9.77□□□□□ -0.85
ATG4D-210ENST00000588972 BAHD1Q8TBE0 780 aaPredicted RBP9.77□□□□□ -0.85
ATG4D-210ENST00000588972 CHAC2Q8WUX2 184 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 PLEKHF1Q96S99 279 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 APBA2Q99767 749 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 DHRS4Q9BTZ2 278 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 TAOK3Q9H2K8 898 aa9.77□□□□□ -0.85
ATG4D-210ENST00000588972 MRPS23Q9Y3D9 190 aaKnown RBP9.77□□□□□ -0.85
ATG4D-210ENST00000588972 CACNA1SQ13698 1873 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 A0A087WZG4 1122 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 TRAV20A0A0B4J274 112 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 GNAT3A8MTJ3 354 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 SHISA8B8ZZ34 492 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 RNMTO43148 476 aaKnown RBP9.76□□□□□ -0.85
ATG4D-210ENST00000588972 OIP5O43482 229 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 GBP1P32455 592 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 CDKN1CP49918 316 aaPredicted RBP9.76□□□□□ -0.85
ATG4D-210ENST00000588972 SLC39A6Q13433 755 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 SLBPQ14493 270 aaKnown RBP eCLIP9.76□□□□□ -0.85
ATG4D-210ENST00000588972 DUOXA2Q1HG44 320 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 AXDND1Q5T1B0 1012 aaPredicted RBP9.76□□□□□ -0.85
ATG4D-210ENST00000588972 YOD1Q5VVQ6 348 aaPredicted RBP9.76□□□□□ -0.85
ATG4D-210ENST00000588972 UBE3DQ7Z6J8 389 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 DTWD1Q8N5C7 304 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 ZNF622Q969S3 477 aaKnown RBP eCLIP9.76□□□□□ -0.85
ATG4D-210ENST00000588972 CDC6Q99741 560 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 BRIP1Q9BX63 1249 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 PRDM10Q9NQV6 1147 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 ATP8A1Q9Y2Q0 1164 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 SCN4AP35499 1836 aa9.76□□□□□ -0.85
ATG4D-210ENST00000588972 TRBV23-1A0A0A0MS06 115 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 FOXN1O15353 648 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 CBFA2T2O43439 604 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 CLEC3AO75596 197 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 WISP1O95388 367 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 STARD3NLO95772 234 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 CAP2P40123 477 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 HSP90AA2PQ14568 343 aaPredicted RBP9.75□□□□□ -0.85
ATG4D-210ENST00000588972 TTLL4Q14679 1199 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 FNDC3BQ53EP0 1204 aaKnown RBP9.75□□□□□ -0.85
ATG4D-210ENST00000588972 HEATR6Q6AI08 1181 aaKnown RBP9.75□□□□□ -0.85
ATG4D-210ENST00000588972 PRR5LQ6MZQ0 368 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 FERMT3Q86UX7 667 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 IL17REQ8NFR9 667 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 CYB5D2Q8WUJ1 264 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 CLUHP3Q96NS8 147 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 AARSD1Q9BTE6 412 aaKnown RBP9.75□□□□□ -0.85
ATG4D-210ENST00000588972 RUSC1Q9BVN2 902 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 KLHL25Q9H0H3 589 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 ATXN3LQ9H3M9 355 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 APEX2Q9UBZ4 518 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 G3BP2Q9UN86 482 aaKnown RBP9.75□□□□□ -0.85
ATG4D-210ENST00000588972 ADAMTS8Q9UP79 889 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 AP4E1Q9UPM8 1137 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 MAPK8IP3Q9UPT6 1336 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
ATG4D-210ENST00000588972 MEGF11A6BM72 1044 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 PDE8AO60658 829 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 ITGAVP06756 1048 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms