RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 PIK3CDO00329 1044 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 NR3C2P08235 984 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 COL6A1P12109 1028 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 LRRC41Q15345 812 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 ARHGEF16Q5VV41 709 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 RNF26Q9BY78 433 aaPredicted RBP20.12■□□□□ 0.81
DNMT1-215ENST00000588913 MAF1Q9H063 256 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 PSTPIP2Q9H939 334 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 VTA1Q9NP79 307 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 XPNPEP3Q9NQH7 507 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 LMBRD1Q9NUN5 540 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 DOCK5Q9H7D0 1870 aa20.12■□□□□ 0.81
DNMT1-215ENST00000588913 RBM47A0AV96 593 aaKnown RBP20.11■□□□□ 0.81
DNMT1-215ENST00000588913 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
DNMT1-215ENST00000588913 MCTP1Q6DN14 999 aa20.11■□□□□ 0.81
DNMT1-215ENST00000588913 GJB4Q9NTQ9 266 aa20.11■□□□□ 0.81
DNMT1-215ENST00000588913 VPS54Q9P1Q0 977 aa20.11■□□□□ 0.81
DNMT1-215ENST00000588913 MSCO60682 206 aa20.11■□□□□ 0.81
DNMT1-215ENST00000588913 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
DNMT1-215ENST00000588913 RARBP10826 455 aa20.11■□□□□ 0.81
DNMT1-215ENST00000588913 MYCLP12524 364 aaPredicted RBP20.11■□□□□ 0.81
DNMT1-215ENST00000588913 TNFAIP2Q03169 654 aa20.11■□□□□ 0.81
DNMT1-215ENST00000588913 TRAF1Q13077 416 aa20.11■□□□□ 0.81
DNMT1-215ENST00000588913 GTF3C6Q969F1 213 aa20.11■□□□□ 0.81
DNMT1-215ENST00000588913 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
DNMT1-215ENST00000588913 LOC102724159A0A0B4J2E5 919 aa20.1■□□□□ 0.81
DNMT1-215ENST00000588913 SMCO2A6NFE2 343 aa20.1■□□□□ 0.81
DNMT1-215ENST00000588913 FDPSP14324 419 aaKnown RBP20.1■□□□□ 0.81
DNMT1-215ENST00000588913 PWP2Q15269 919 aaKnown RBP20.1■□□□□ 0.81
DNMT1-215ENST00000588913 CCSAPQ6IQ19 270 aaPredicted RBP20.1■□□□□ 0.81
DNMT1-215ENST00000588913 VSIG10LQ86VR7 867 aa20.1■□□□□ 0.81
DNMT1-215ENST00000588913 KLHDC9Q8NEP7 349 aa20.1■□□□□ 0.81
DNMT1-215ENST00000588913 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
DNMT1-215ENST00000588913 BCAS3Q9H6U6 928 aa20.1■□□□□ 0.81
DNMT1-215ENST00000588913 RIC8AQ9NPQ8 531 aa20.1■□□□□ 0.81
DNMT1-215ENST00000588913 JAK2O60674 1132 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 DUSP11O75319 330 aaKnown RBP20.09■□□□□ 0.81
DNMT1-215ENST00000588913 CLK2P49760 499 aaKnown RBP20.09■□□□□ 0.81
DNMT1-215ENST00000588913 BEX3Q00994 111 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 MLLT1Q03111 559 aaPredicted RBP20.09■□□□□ 0.81
DNMT1-215ENST00000588913 ANKRD1Q15327 319 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 CCDC62Q6P9F0 684 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 SEPT14Q6ZU15 432 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 SAMD3Q8N6K7 520 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 ANKLE1Q8NAG6 615 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 RASGRP4Q8TDF6 673 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 NAP1L5Q96NT1 182 aaPredicted RBP20.09■□□□□ 0.81
DNMT1-215ENST00000588913 IWS1Q96ST2 819 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 WDR11Q9BZH6 1224 aa20.09■□□□□ 0.81
DNMT1-215ENST00000588913 PPP1R18Q6NYC8 613 aa20.08■□□□□ 0.81
DNMT1-215ENST00000588913 ZSCAN30Q86W11 494 aa20.08■□□□□ 0.81
DNMT1-215ENST00000588913 UPF3AQ9H1J1 476 aaKnown RBP20.08■□□□□ 0.81
DNMT1-215ENST00000588913 PDE4DIPQ5VU43 2346 aa20.08■□□□□ 0.81
DNMT1-215ENST00000588913 MYH7BA7E2Y1 1941 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 CPLX1O14810 134 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 SSRP1Q08945 709 aaKnown RBP20.08■□□□□ 0.8
DNMT1-215ENST00000588913 SEMA3FQ13275 785 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 CUL4AQ13619 759 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 NPY5RQ15761 445 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 STXBP2Q15833 593 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 LY6KQ17RY6 165 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 NSUN7Q8NE18 718 aaKnown RBP20.08■□□□□ 0.8
DNMT1-215ENST00000588913 CUL5Q93034 780 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 PCDHA6Q9UN73 950 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 PCDHA8Q9Y5H6 950 aa20.08■□□□□ 0.8
DNMT1-215ENST00000588913 DNM1LO00429 736 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 TPM2P07951 284 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 ADCY7P51828 1080 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 GJA9P57773 515 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 SP2Q02086 613 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 ZSCAN23Q3MJ62 389 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 DUSP28Q4G0W2 176 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 IQSEC1Q6DN90 963 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 TLK2Q86UE8 772 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 SYAP1Q96A49 352 aaPredicted RBP20.07■□□□□ 0.8
DNMT1-215ENST00000588913 FERMT2Q96AC1 680 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 ZMYND12Q9H0C1 365 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 RTEL1Q9NZ71 1219 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 TELO2Q9Y4R8 837 aa20.07■□□□□ 0.8
DNMT1-215ENST00000588913 DYNC1LI2O43237 492 aaPredicted RBP20.06■□□□□ 0.8
DNMT1-215ENST00000588913 TERF1P54274 439 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 JAKMIP3Q5VZ66 844 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 C11orf49Q9H6J7 331 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 LIMCH1Q9UPQ0 1083 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 hCG_1984214I3L0E3 225 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 EDIL3O43854 480 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 SORBS3O60504 671 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 EIF3JO75822 258 aaKnown RBP20.06■□□□□ 0.8
DNMT1-215ENST00000588913 C6orf222P0C671 652 aaPredicted RBP20.06■□□□□ 0.8
DNMT1-215ENST00000588913 LRRC26Q2I0M4 334 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 NECAB2Q7Z6G3 386 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 CCDC83Q8IWF9 413 aa20.06■□□□□ 0.8
DNMT1-215ENST00000588913 ZNF713Q8N859 430 aaPredicted RBP20.06■□□□□ 0.8
DNMT1-215ENST00000588913 SENP6Q9GZR1 1112 aaPredicted RBP20.06■□□□□ 0.8
DNMT1-215ENST00000588913 ESYT2A0FGR8 921 aa20.05■□□□□ 0.8
DNMT1-215ENST00000588913 DEXIO95424 95 aa20.05■□□□□ 0.8
DNMT1-215ENST00000588913 TXNP10599 105 aaKnown RBP20.05■□□□□ 0.8
DNMT1-215ENST00000588913 NKX3-2P78367 333 aa20.05■□□□□ 0.8
DNMT1-215ENST00000588913 AKAP17AQ02040 695 aaKnown RBP20.05■□□□□ 0.8
DNMT1-215ENST00000588913 KCNA10Q16322 511 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms