RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 IKBKEQ14164 716 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 MBTPS1Q14703 1052 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 COL19A1Q14993 1142 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 TRAF7Q6Q0C0 670 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.15□□□□□ -0.94
NFIX-211ENST00000588680 MYOCDQ8IZQ8 938 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 BANK1Q8NDB2 785 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 SP7Q8TDD2 431 aaPredicted RBP9.15□□□□□ -0.94
NFIX-211ENST00000588680 AFG1LQ8WV93 481 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 KAT2BQ92831 832 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 WNT8BQ93098 351 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 PABPC5Q96DU9 382 aaKnown RBP9.15□□□□□ -0.94
NFIX-211ENST00000588680 MFSD14AQ96MC6 490 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 PRKAG3Q9UGI9 489 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 MUTYHQ9UIF7 546 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 FAM50BQ9Y247 325 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 INSL6Q9Y581 213 aa9.15□□□□□ -0.94
NFIX-211ENST00000588680 FRMPD2Q68DX3 1309 aaPredicted RBP9.14□□□□□ -0.95
NFIX-211ENST00000588680 RNF113AO15541 343 aaKnown RBP9.14□□□□□ -0.95
NFIX-211ENST00000588680 SMARCA5O60264 1052 aaPredicted RBP9.14□□□□□ -0.95
NFIX-211ENST00000588680 HTRA4P83105 476 aaPredicted RBP9.14□□□□□ -0.95
NFIX-211ENST00000588680 PPARAQ07869 468 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 MKRN4PQ13434 485 aaPredicted RBP9.14□□□□□ -0.95
NFIX-211ENST00000588680 CLUL1Q15846 466 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 TRIM71Q2Q1W2 868 aaKnown RBP9.14□□□□□ -0.95
NFIX-211ENST00000588680 EPC2Q52LR7 807 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 SYDE2Q5VT97 1194 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 TSHZ3Q63HK5 1081 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 TTBK2Q6IQ55 1244 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 RNF207Q6ZRF8 634 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 RPAINQ86UA6 219 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 IFNL3Q8IZI9 196 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 KBTBD3Q8NAB2 608 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 DCAF4Q8WV16 495 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 CLEC4DQ8WXI8 215 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 MPHOSPH6Q99547 160 aaKnown RBP9.14□□□□□ -0.95
NFIX-211ENST00000588680 NSUN3Q9H649 340 aaKnown RBP9.14□□□□□ -0.95
NFIX-211ENST00000588680 CLDND1Q9NY35 253 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 GTF2IRD1Q9UHL9 959 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 CTNNA3Q9UI47 895 aa9.14□□□□□ -0.95
NFIX-211ENST00000588680 TSPY2A6NKD2 308 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 ST18O60284 1047 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 LGR5O75473 907 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 AMHP03971 560 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 SLC3A2P08195 630 aaKnown RBP9.13□□□□□ -0.95
NFIX-211ENST00000588680 ZNF286BP0CG31 522 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 PTPN5P54829 565 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 RPS6P62753 249 aaKnown RBP9.13□□□□□ -0.95
NFIX-211ENST00000588680 ARHGAP1Q07960 439 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 GPM6BQ13491 265 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 HERC4Q5GLZ8 1057 aaPredicted RBP9.13□□□□□ -0.95
NFIX-211ENST00000588680 PPP4R3BQ5MIZ7 849 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 ZNF618Q5T7W0 954 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 CHST3Q7LGC8 479 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 UPF3BQ9BZI7 483 aaKnown RBP9.13□□□□□ -0.95
NFIX-211ENST00000588680 NACAP1Q9BZK3 213 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 NAPBQ9H115 298 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 IL17RBQ9NRM6 502 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 HDAC6Q9UBN7 1215 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
NFIX-211ENST00000588680 VPS13AQ96RL7 3174 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 TPRP12270 2363 aaKnown RBP9.13□□□□□ -0.95
NFIX-211ENST00000588680 EPG5Q9HCE0 2579 aa9.13□□□□□ -0.95
NFIX-211ENST00000588680 EP300Q09472 2414 aaPredicted RBP9.12□□□□□ -0.95
NFIX-211ENST00000588680 LOXHD1Q8IVV2 1947 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 PATL2C9JE40 543 aaKnown RBP9.12□□□□□ -0.95
NFIX-211ENST00000588680 H3BNC9 293 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 GH1P01241 217 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 ZFYP08048 801 aaPredicted RBP9.12□□□□□ -0.95
NFIX-211ENST00000588680 LTBRP36941 435 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 PSEN2P49810 448 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 ZNF200P98182 395 aaPredicted RBP9.12□□□□□ -0.95
NFIX-211ENST00000588680 PTK7Q13308 1070 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 SMAD2Q15796 467 aaKnown RBP9.12□□□□□ -0.95
NFIX-211ENST00000588680 LY6KQ17RY6 165 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 IER5LQ5T953 404 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 CCDC62Q6P9F0 684 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 BTNL9Q6UXG8 535 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 FBXO11Q86XK2 927 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 RNF135Q8IUD6 432 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 C7orf31Q8N865 590 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 DNERQ8NFT8 737 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 SAMD11Q96NU1 681 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 YME1L1Q96TA2 773 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 POP1Q99575 1024 aaKnown RBP9.12□□□□□ -0.95
NFIX-211ENST00000588680 ALG1Q9BT22 464 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 LRRCC1Q9C099 1032 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 ECHDC1Q9NTX5 307 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 MYO15AQ9UKN7 3530 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 TTC3P53804 2025 aa9.12□□□□□ -0.95
NFIX-211ENST00000588680 EMSYQ7Z589 1322 aa9.11□□□□□ -0.95
NFIX-211ENST00000588680 WDR19Q8NEZ3 1342 aa9.11□□□□□ -0.95
NFIX-211ENST00000588680 LAMA4Q16363 1823 aa9.11□□□□□ -0.95
NFIX-211ENST00000588680 TBX10O75333 385 aa9.11□□□□□ -0.95
NFIX-211ENST00000588680 F2P00734 622 aa9.11□□□□□ -0.95
NFIX-211ENST00000588680 CASTP20810 708 aaKnown RBP9.11□□□□□ -0.95
NFIX-211ENST00000588680 CTDSPL2Q05D32 466 aa9.11□□□□□ -0.95
NFIX-211ENST00000588680 DLX2Q07687 328 aaPredicted RBP9.11□□□□□ -0.95
NFIX-211ENST00000588680 TCF15Q12870 199 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms