RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 LY6KQ17RY6 165 aa25.65■■□□□ 1.7
DDX39A-205ENST00000586993 GLT1D1Q96MS3 346 aa25.65■■□□□ 1.7
DDX39A-205ENST00000586993 PSTPIP2Q9H939 334 aa25.65■■□□□ 1.7
DDX39A-205ENST00000586993 NCOA5Q9HCD5 579 aaKnown RBP25.65■■□□□ 1.7
DDX39A-205ENST00000586993 NKRFO15226 690 aaKnown RBP eCLIP25.64■■□□□ 1.7
DDX39A-205ENST00000586993 UBE2SQ16763 222 aa25.64■■□□□ 1.7
DDX39A-205ENST00000586993 SMARCC2Q8TAQ2 1214 aa25.64■■□□□ 1.7
DDX39A-205ENST00000586993 PDLIM7Q9NR12 457 aa25.64■■□□□ 1.7
DDX39A-205ENST00000586993 MYH7BA7E2Y1 1941 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 CCDC196A0A1B0GTZ2 297 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 STXBP3O00186 592 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 PQBP1O60828 265 aaKnown RBP25.63■■□□□ 1.69
DDX39A-205ENST00000586993 PPFIA3O75145 1194 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 CCND2P30279 289 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 MAGEA10P43363 369 aaPredicted RBP25.63■■□□□ 1.69
DDX39A-205ENST00000586993 CCT2P78371 535 aaKnown RBP25.63■■□□□ 1.69
DDX39A-205ENST00000586993 NTRK3Q16288 839 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 SH3RF1Q7Z6J0 888 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 CUL5Q93034 780 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 GDF15Q99988 308 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 PDRG1Q9NUG6 133 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 DDX41Q9UJV9 622 aaKnown RBP25.63■■□□□ 1.69
DDX39A-205ENST00000586993 GRIN2DO15399 1336 aa25.63■■□□□ 1.69
DDX39A-205ENST00000586993 SCN10AQ9Y5Y9 1956 aa25.62■■□□□ 1.69
DDX39A-205ENST00000586993 CDK7P50613 346 aa25.62■■□□□ 1.69
DDX39A-205ENST00000586993 ANAPC15P60006 121 aa25.62■■□□□ 1.69
DDX39A-205ENST00000586993 MRPS9P82933 396 aaKnown RBP25.62■■□□□ 1.69
DDX39A-205ENST00000586993 ARHGAP1Q07960 439 aa25.62■■□□□ 1.69
DDX39A-205ENST00000586993 ANKRD33Q7Z3H0 272 aa25.62■■□□□ 1.69
DDX39A-205ENST00000586993 PHKBQ93100 1093 aa25.62■■□□□ 1.69
DDX39A-205ENST00000586993 VTI1AQ96AJ9 217 aa25.62■■□□□ 1.69
DDX39A-205ENST00000586993 IL17RAQ96F46 866 aa25.62■■□□□ 1.69
DDX39A-205ENST00000586993 A0A0U1RQG5 324 aaPredicted RBP25.61■■□□□ 1.69
DDX39A-205ENST00000586993 TRIM43BA6NCK2 446 aa25.61■■□□□ 1.69
DDX39A-205ENST00000586993 A6NJR5 290 aa25.61■■□□□ 1.69
DDX39A-205ENST00000586993 NAPAP54920 295 aa25.61■■□□□ 1.69
DDX39A-205ENST00000586993 PSMC6P62333 389 aa25.61■■□□□ 1.69
DDX39A-205ENST00000586993 PKN1Q16512 942 aa25.61■■□□□ 1.69
DDX39A-205ENST00000586993 C8orf34Q49A92 452 aa25.61■■□□□ 1.69
DDX39A-205ENST00000586993 TRIM43Q96BQ3 446 aaPredicted RBP25.61■■□□□ 1.69
DDX39A-205ENST00000586993 PRDM5Q9NQX1 630 aaPredicted RBP25.61■■□□□ 1.69
DDX39A-205ENST00000586993 BARHL2Q9NY43 387 aa25.61■■□□□ 1.69
DDX39A-205ENST00000586993 MRVI1Q9Y6F6 885 aa25.61■■□□□ 1.69
DDX39A-205ENST00000586993 ARVCFO00192 962 aa25.6■■□□□ 1.69
DDX39A-205ENST00000586993 ZEB2O60315 1214 aa25.6■■□□□ 1.69
DDX39A-205ENST00000586993 GH1P01241 217 aa25.6■■□□□ 1.69
DDX39A-205ENST00000586993 CPT1AP50416 773 aa25.6■■□□□ 1.69
DDX39A-205ENST00000586993 PURAQ00577 322 aaKnown RBP25.6■■□□□ 1.69
DDX39A-205ENST00000586993 PFKFB3Q16875 520 aaPredicted RBP25.6■■□□□ 1.69
DDX39A-205ENST00000586993 PPP1R18Q6NYC8 613 aa25.6■■□□□ 1.69
DDX39A-205ENST00000586993 AFG1LQ8WV93 481 aa25.6■■□□□ 1.69
DDX39A-205ENST00000586993 DOCK5Q9H7D0 1870 aa25.6■■□□□ 1.69
DDX39A-205ENST00000586993 CABYRO75952 493 aa25.59■■□□□ 1.69
DDX39A-205ENST00000586993 MYL3P08590 195 aa25.59■■□□□ 1.69
DDX39A-205ENST00000586993 BMP8BP34820 402 aa25.59■■□□□ 1.69
DDX39A-205ENST00000586993 MDM2Q00987 491 aaPredicted RBP25.59■■□□□ 1.69
DDX39A-205ENST00000586993 SP2Q02086 613 aa25.59■■□□□ 1.69
DDX39A-205ENST00000586993 FAAP100Q0VG06 881 aa25.59■■□□□ 1.69
DDX39A-205ENST00000586993 SLC43A3Q8NBI5 491 aa25.59■■□□□ 1.69
DDX39A-205ENST00000586993 TOX2Q96NM4 488 aa25.59■■□□□ 1.69
DDX39A-205ENST00000586993 INPP4AQ96PE3 977 aaPredicted RBP25.59■■□□□ 1.69
DDX39A-205ENST00000586993 hCG_1984214I3L0E3 225 aa25.58■■□□□ 1.69
DDX39A-205ENST00000586993 PRPF3O43395 683 aaKnown RBP25.58■■□□□ 1.69
DDX39A-205ENST00000586993 CLTBP09497 229 aa25.58■■□□□ 1.69
DDX39A-205ENST00000586993 SCG2P13521 617 aa25.58■■□□□ 1.69
DDX39A-205ENST00000586993 ITGB8P26012 769 aa25.58■■□□□ 1.69
DDX39A-205ENST00000586993 SEMA3FQ13275 785 aa25.58■■□□□ 1.69
DDX39A-205ENST00000586993 PCNX4Q63HM2 1172 aa25.58■■□□□ 1.69
DDX39A-205ENST00000586993 ZNF713Q8N859 430 aaPredicted RBP25.58■■□□□ 1.69
DDX39A-205ENST00000586993 ZNF274Q96GC6 653 aaPredicted RBP25.58■■□□□ 1.69
DDX39A-205ENST00000586993 RIC8AQ9NPQ8 531 aa25.58■■□□□ 1.69
DDX39A-205ENST00000586993 POLR3EQ9NVU0 708 aa25.58■■□□□ 1.69
DDX39A-205ENST00000586993 LAMA3Q16787 3333 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 ADAMTS3O15072 1205 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 SORBS3O60504 671 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 MMP3P08254 477 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 IFNAR1P17181 557 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 UBA1P22314 1058 aaKnown RBP25.57■■□□□ 1.68
DDX39A-205ENST00000586993 ITGA7Q13683 1181 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 FAM126BQ8IXS8 530 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 BCAS3Q9H6U6 928 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 RTEL1Q9NZ71 1219 aa25.57■■□□□ 1.68
DDX39A-205ENST00000586993 ADCY7P51828 1080 aa25.56■■□□□ 1.68
DDX39A-205ENST00000586993 STK3Q13188 491 aa25.56■■□□□ 1.68
DDX39A-205ENST00000586993 PPP1R13LQ8WUF5 828 aa25.56■■□□□ 1.68
DDX39A-205ENST00000586993 EMID1Q96A84 441 aaPredicted RBP25.56■■□□□ 1.68
DDX39A-205ENST00000586993 PGBD1Q96JS3 809 aa25.56■■□□□ 1.68
DDX39A-205ENST00000586993 PRKAG2Q9UGJ0 569 aa25.56■■□□□ 1.68
DDX39A-205ENST00000586993 PCDHA6Q9UN73 950 aa25.56■■□□□ 1.68
DDX39A-205ENST00000586993 PCDHA8Q9Y5H6 950 aa25.56■■□□□ 1.68
DDX39A-205ENST00000586993 SMCO2A6NFE2 343 aa25.55■■□□□ 1.68
DDX39A-205ENST00000586993 DCDC2CA8MYV0 355 aa25.55■■□□□ 1.68
DDX39A-205ENST00000586993 SOX1O00570 391 aaPredicted RBP25.55■■□□□ 1.68
DDX39A-205ENST00000586993 KIAA0355O15063 1070 aa25.55■■□□□ 1.68
DDX39A-205ENST00000586993 MTG1Q9BT17 334 aaPredicted RBP25.55■■□□□ 1.68
DDX39A-205ENST00000586993 SLC26A6Q9BXS9 759 aa25.55■■□□□ 1.68
DDX39A-205ENST00000586993 RNF26Q9BY78 433 aaPredicted RBP25.55■■□□□ 1.68
DDX39A-205ENST00000586993 ALDH8A1Q9H2A2 487 aaPredicted RBP25.55■■□□□ 1.68
DDX39A-205ENST00000586993 TMEM260Q9NX78 707 aa25.55■■□□□ 1.68
DDX39A-205ENST00000586993 TBX21Q9UL17 535 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms