RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SAFBQ15424 915 aaKnown RBP eCLIP21.89■■□□□ 1.09
DDX39A-204ENST00000586558 CCDC144BQ3MJ40 725 aa21.89■■□□□ 1.09
DDX39A-204ENST00000586558 IQSEC1Q6DN90 963 aa21.89■■□□□ 1.09
DDX39A-204ENST00000586558 TAPT1Q6NXT6 567 aa21.89■■□□□ 1.09
DDX39A-204ENST00000586558 EEPD1Q7L9B9 569 aa21.89■■□□□ 1.09
DDX39A-204ENST00000586558 KRT25Q7Z3Z0 450 aa21.89■■□□□ 1.09
DDX39A-204ENST00000586558 FBXO18Q8NFZ0 1043 aa21.89■■□□□ 1.09
DDX39A-204ENST00000586558 SCFD2Q8WU76 684 aa21.89■■□□□ 1.09
DDX39A-204ENST00000586558 ADAMTS3O15072 1205 aa21.88■■□□□ 1.09
DDX39A-204ENST00000586558 GNPTABQ3T906 1256 aa21.88■■□□□ 1.09
DDX39A-204ENST00000586558 RASGRP4Q8TDF6 673 aa21.88■■□□□ 1.09
DDX39A-204ENST00000586558 INPP4AQ96PE3 977 aaPredicted RBP21.88■■□□□ 1.09
DDX39A-204ENST00000586558 MCM3APO60318 1980 aa21.87■■□□□ 1.09
DDX39A-204ENST00000586558 RARBP10826 455 aa21.87■■□□□ 1.09
DDX39A-204ENST00000586558 MRPS9P82933 396 aaKnown RBP21.87■■□□□ 1.09
DDX39A-204ENST00000586558 ARHGAP4P98171 946 aa21.87■■□□□ 1.09
DDX39A-204ENST00000586558 KCNV1Q6PIU1 500 aa21.87■■□□□ 1.09
DDX39A-204ENST00000586558 DIS3L2Q8IYB7 885 aaKnown RBP21.87■■□□□ 1.09
DDX39A-204ENST00000586558 CRYGNQ8WXF5 182 aa21.87■■□□□ 1.09
DDX39A-204ENST00000586558 PGBD1Q96JS3 809 aa21.87■■□□□ 1.09
DDX39A-204ENST00000586558 DEFB118Q96PH6 123 aa21.87■■□□□ 1.09
DDX39A-204ENST00000586558 CCDC194A0A1B0GVG4 234 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 CYP3A4P08684 503 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 PDCP20941 246 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 ADCYAP1R1P41586 468 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 FOSBP53539 338 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 TNFAIP2Q03169 654 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 TTLL4Q14679 1199 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 NONOQ15233 471 aaKnown RBP eCLIP21.86■■□□□ 1.092e-7■■■□□ 16.3
DDX39A-204ENST00000586558 WDR11Q9BZH6 1224 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 PDGFCQ9NRA1 345 aa21.86■■□□□ 1.09
DDX39A-204ENST00000586558 NKRFO15226 690 aaKnown RBP eCLIP21.85■■□□□ 1.09
DDX39A-204ENST00000586558 DUSP11O75319 330 aaKnown RBP21.85■■□□□ 1.09
DDX39A-204ENST00000586558 RGS20O76081 388 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 SGPL1O95470 568 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 HSP90AA1P07900 732 aaKnown RBP21.85■■□□□ 1.09
DDX39A-204ENST00000586558 TGFB3P10600 412 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 GJA8P48165 433 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 DUSP28Q4G0W2 176 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 LHX8Q68G74 356 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 SEPT14Q6ZU15 432 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 NLRX1Q86UT6 975 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 OXER1Q8TDS5 423 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 U2AF1L4Q8WU68 220 aaKnown RBP21.85■■□□□ 1.09
DDX39A-204ENST00000586558 GPRASP2Q96D09 838 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 CDHR1Q96JP9 859 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 CRISPLD2Q9H0B8 497 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 UBIAD1Q9Y5Z9 338 aa21.85■■□□□ 1.09
DDX39A-204ENST00000586558 FIBPO43427 364 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 ICAM3P32942 547 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 USP11P51784 963 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 GUCY1B3Q02153 619 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 BECN1Q14457 450 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 CCDC62Q6P9F0 684 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 NIPA1Q7RTP0 329 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 TNFRSF25Q93038 417 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 Q9Y3F1 56 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 MRVI1Q9Y6F6 885 aa21.84■■□□□ 1.09
DDX39A-204ENST00000586558 BTBD18B2RXH4 712 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 MAFGO15525 162 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 TXNP10599 105 aaKnown RBP21.83■■□□□ 1.09
DDX39A-204ENST00000586558 SMPD1P17405 629 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 ZNF76P36508 570 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 NR5A1Q13285 461 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 CEP55Q53EZ4 464 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 TBCKQ8TEA7 893 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 FOXP1Q9H334 677 aaPredicted RBP21.83■■□□□ 1.09
DDX39A-204ENST00000586558 XPNPEP3Q9NQH7 507 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 OGDHLQ9ULD0 1010 aa21.83■■□□□ 1.09
DDX39A-204ENST00000586558 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.82■■□□□ 1.08
DDX39A-204ENST00000586558 CCDC85CA6NKD9 419 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 SPATA31C2B4DYI2 1134 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 H3BQV1 296 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 ADCY6O43306 1168 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 ITGB5P18084 799 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 CIITAP33076 1130 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 LARP1BQ659C4 914 aaKnown RBP21.82■■□□□ 1.08
DDX39A-204ENST00000586558 MXRA8Q9BRK3 442 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 SPC25Q9HBM1 224 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 JADE2Q9NQC1 790 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 RTEL1Q9NZ71 1219 aa21.82■■□□□ 1.08
DDX39A-204ENST00000586558 GNEQ9Y223 722 aaKnown RBP21.82■■□□□ 1.08
DDX39A-204ENST00000586558 MEIS1O00470 390 aa21.81■■□□□ 1.08
DDX39A-204ENST00000586558 TFRCP02786 760 aaKnown RBP21.81■■□□□ 1.08
DDX39A-204ENST00000586558 MTMR1Q13613 665 aa21.81■■□□□ 1.08
DDX39A-204ENST00000586558 GNL2Q13823 731 aaKnown RBP21.81■■□□□ 1.08
DDX39A-204ENST00000586558 MOXD1Q6UVY6 613 aa21.81■■□□□ 1.08
DDX39A-204ENST00000586558 PIK3AP1Q6ZUJ8 805 aa21.81■■□□□ 1.08
DDX39A-204ENST00000586558 TLK2Q86UE8 772 aa21.81■■□□□ 1.08
DDX39A-204ENST00000586558 ARRDC4Q8NCT1 418 aa21.81■■□□□ 1.08
DDX39A-204ENST00000586558 ZFP91Q96JP5 570 aaPredicted RBP21.81■■□□□ 1.08
DDX39A-204ENST00000586558 NAP1L4Q99733 375 aaKnown RBP21.81■■□□□ 1.08
DDX39A-204ENST00000586558 AP5M1Q9H0R1 490 aa21.81■■□□□ 1.08
DDX39A-204ENST00000586558 UPF3AQ9H1J1 476 aaKnown RBP21.81■■□□□ 1.08
DDX39A-204ENST00000586558 DDX41Q9UJV9 622 aaKnown RBP21.81■■□□□ 1.08
DDX39A-204ENST00000586558 SYNRGQ9UMZ2 1314 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 ARIH2O95376 493 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 GJA9P57773 515 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 NKX3-2P78367 333 aa21.8■■□□□ 1.08
DDX39A-204ENST00000586558 SETQ01105 290 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms