RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 GNPTABQ3T906 1256 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 SEPT14Q6ZU15 432 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 FCHSD1Q86WN1 690 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 PIBF1Q8WXW3 757 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 EMID1Q96A84 441 aaPredicted RBP11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 PSTPIP2Q9H939 334 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 EHMT1Q9H9B1 1298 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 PDLIM7Q9NR12 457 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 KIAA0355O15063 1070 aa11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 PQBP1O60828 265 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 MAGEA10P43363 369 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 FUT2Q10981 343 aa11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 LAMC2Q13753 1193 aa11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 CXCL17Q6UXB2 119 aa11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 HEATR3Q7Z4Q2 680 aa11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 RAB11FIP4Q86YS3 637 aa11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 CMTR1Q8N1G2 835 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 SLC43A3Q8NBI5 491 aa11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 MTG1Q9BT17 334 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 PRDM5Q9NQX1 630 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 NAP1L2Q9ULW6 460 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 MRVI1Q9Y6F6 885 aa11.97□□□□□ -0.49
SMARCA4-209ENST00000586122 SPDYE3A6NKU9 549 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 MEIS2O14770 477 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 CPA1P15085 419 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 ICAM3P32942 547 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 PURAQ00577 322 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 APOBRQ0VD83 1088 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 ITGA7Q13683 1181 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 PCNX4Q63HM2 1172 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 MCTP2Q6DN12 878 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 CCDC82Q8N4S0 544 aa11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 CCDC12Q8WUD4 166 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 UBE2OQ9C0C9 1292 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 FAM217BQ9NTX9 383 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 DDX41Q9UJV9 622 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-209ENST00000586122 DNAH12Q6ZR08 3092 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 ARIH2O95376 493 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 RAG1P15918 1043 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 CDC27P30260 824 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 NAPAP54920 295 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 AKAP17AQ02040 695 aaKnown RBP11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 ARHGAP1Q07960 439 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 PFKFB3Q16875 520 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 WWC2Q6AWC2 1192 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 NFRKBQ6P4R8 1299 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 USP17L6PQ6QN14 398 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 NLRX1Q86UT6 975 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 FAM126BQ8IXS8 530 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 TDHQ8IZJ6 230 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 PPTC7Q8NI37 304 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 ZNF274Q96GC6 653 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 CDHR1Q96JP9 859 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 INPP4AQ96PE3 977 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 RNF26Q9BY78 433 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 RIC8AQ9NPQ8 531 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 TMEM39AQ9NV64 488 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 BARHL2Q9NY43 387 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 TBX21Q9UL17 535 aa11.95□□□□□ -0.5
SMARCA4-209ENST00000586122 ESYT2A0FGR8 921 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 PRPF3O43395 683 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 FIBPO43427 364 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 RGS20O76081 388 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 MMP3P08254 477 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 MYL3P08590 195 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 SUPT20HL2P0C7V6 817 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 SCG2P13521 617 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 IFNAR1P17181 557 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 PDIA3P30101 505 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 ADCY7P51828 1080 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 AP3B2Q13367 1082 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 NEDD9Q14511 834 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 DGKDQ16760 1214 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 LY6KQ17RY6 165 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 TMEM63BQ5T3F8 832 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 CPLX2Q6PUV4 134 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 DHX37Q8IY37 1157 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 FAM177A1Q8N128 213 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 IL31RAQ8NI17 732 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 AFG1LQ8WV93 481 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 COPS5Q92905 334 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 GPRASP2Q96D09 838 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 KATNAL1Q9BW62 490 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 ALDH8A1Q9H2A2 487 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 PDRG1Q9NUG6 133 aa11.94□□□□□ -0.5
SMARCA4-209ENST00000586122 hCG_1642624A0A1W2PR95 340 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 TRIM43BA6NCK2 446 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 STXBP3O00186 592 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 MAFGO15525 162 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 PPFIA4O75335 1185 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms