RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 PCDHA13Q9Y5I0 950 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 EP400Q96L91 3159 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 MAST2Q6P0Q8 1798 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 MATR3P43243 847 aaKnown RBP eCLIP20.48■□□□□ 0.87
CACTIN-204ENST00000585942 RRAGAQ7L523 313 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 ZNF804AQ7Z570 1209 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 CREG2Q8IUH2 290 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 LEMD3Q9Y2U8 911 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 LDHCP07864 332 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 CCDC172P0C7W6 258 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 GRAPQ13588 217 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 GRAPLQ8TC17 118 aaPredicted RBP20.48■□□□□ 0.87
CACTIN-204ENST00000585942 LARP4BQ92615 738 aaKnown RBP20.48■□□□□ 0.87
CACTIN-204ENST00000585942 SALL4Q9UJQ4 1053 aa20.48■□□□□ 0.87
CACTIN-204ENST00000585942 ZC3H4Q9UPT8 1303 aaKnown RBP20.47■□□□□ 0.87
CACTIN-204ENST00000585942 NRAPQ86VF7 1730 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 A0A1W2PQJ5 194 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 KIF11P52732 1056 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 GPSM2P81274 684 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 SEMA3FQ13275 785 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 LRRC47Q8N1G4 583 aaKnown RBP20.47■□□□□ 0.87
CACTIN-204ENST00000585942 CXorf56Q9H5V9 222 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 LRRC53A6NM62 1247 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 CKAP4Q07065 602 aaKnown RBP20.47■□□□□ 0.87
CACTIN-204ENST00000585942 FIGNQ5HY92 759 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 CCNI2Q6ZMN8 369 aaPredicted RBP20.47■□□□□ 0.87
CACTIN-204ENST00000585942 CD209Q9NNX6 404 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 CEP83Q9Y592 693 aa20.47■□□□□ 0.87
CACTIN-204ENST00000585942 GGCXP38435 758 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 ECM1Q16610 540 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 BANK1Q8NDB2 785 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 CDK5RAP3Q96JB5 506 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 ZNF287Q9HBT7 754 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 MED4Q9NPJ6 270 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 CCNL1Q9UK58 526 aaPredicted RBP20.46■□□□□ 0.87
CACTIN-204ENST00000585942 SNX12Q9UMY4 172 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 ANO9A1A5B4 782 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 NFRKBQ6P4R8 1299 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 EFCAB13Q8IY85 973 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 LRRC1Q9BTT6 524 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 SELENOOQ9BVL4 669 aa20.46■□□□□ 0.87
CACTIN-204ENST00000585942 DMGDHQ9UI17 866 aaKnown RBP20.46■□□□□ 0.87
CACTIN-204ENST00000585942 GPR75-ASB3A0A0A6YYF3 556 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 NCK2O43639 380 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 AKR1B10O60218 316 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 PDHBP11177 359 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 CDK17Q00537 523 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 SLC7A5Q01650 507 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 SKIDA1Q1XH10 827 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 SWT1Q5T5J6 900 aaKnown RBP20.45■□□□□ 0.86
CACTIN-204ENST00000585942 UNC13DQ70J99 1090 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 TADA2BQ86TJ2 420 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 MICALL1Q8N3F8 863 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 DDX12PQ92771 950 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 SH2D4AQ9H788 454 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 KANSL2Q9H9L4 492 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 GPCPD1Q9NPB8 672 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
CACTIN-204ENST00000585942 TARSL2A2RTX5 802 aaKnown RBP20.45■□□□□ 0.86
CACTIN-204ENST00000585942 UFL1O94874 794 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 PRPF6O94906 941 aaKnown RBP20.45■□□□□ 0.86
CACTIN-204ENST00000585942 CPP00450 1065 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 RHBDL3P58872 404 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 GFPT1Q06210 699 aaPredicted RBP20.45■□□□□ 0.86
CACTIN-204ENST00000585942 UBE2SQ16763 222 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
CACTIN-204ENST00000585942 ACBD3Q9H3P7 528 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 NAV1Q8NEY1 1877 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 SNX29Q8TEQ0 813 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 RPGRIP1Q96KN7 1286 aa20.45■□□□□ 0.86
CACTIN-204ENST00000585942 AGPSO00116 658 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 HNRNPH3P31942 346 aaKnown RBP20.44■□□□□ 0.86
CACTIN-204ENST00000585942 TNNI2P48788 182 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 AARSP49588 968 aaKnown RBP eCLIP20.44■□□□□ 0.863e-6■■■■■ 61.8
CACTIN-204ENST00000585942 PICALMQ13492 652 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 MAP9Q49MG5 647 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 MFSD14BQ5SR56 506 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 TRIM58Q8NG06 486 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 TANGO6Q9C0B7 1094 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 RIOX1Q9H6W3 641 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 VIPAS39Q9H9C1 493 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 TBC1D7Q9P0N9 293 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 DDX60LQ5H9U9 1706 aaKnown RBP20.44■□□□□ 0.86
CACTIN-204ENST00000585942 SBF2Q86WG5 1849 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 USO1O60763 962 aaKnown RBP20.44■□□□□ 0.86
CACTIN-204ENST00000585942 RFC4P35249 363 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 APBA1Q02410 837 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 MAN2A1Q16706 1144 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 NLRC4Q9NPP4 1024 aa20.44■□□□□ 0.86
CACTIN-204ENST00000585942 TACC1O75410 805 aa20.43■□□□□ 0.86
CACTIN-204ENST00000585942 GSCP56915 257 aaPredicted RBP20.43■□□□□ 0.86
CACTIN-204ENST00000585942 LRRC55Q6ZSA7 311 aa20.43■□□□□ 0.86
CACTIN-204ENST00000585942 TMC4Q7Z404 712 aa20.43■□□□□ 0.86
CACTIN-204ENST00000585942 BAP1Q92560 729 aa20.43■□□□□ 0.86
CACTIN-204ENST00000585942 BUB1O43683 1085 aa20.43■□□□□ 0.86
CACTIN-204ENST00000585942 MCM3P25205 808 aa20.43■□□□□ 0.86
CACTIN-204ENST00000585942 PPP1R2P41236 205 aa20.43■□□□□ 0.86
CACTIN-204ENST00000585942 NT5C2P49902 561 aa20.43■□□□□ 0.86
CACTIN-204ENST00000585942 GUF1Q8N442 669 aaKnown RBP20.43■□□□□ 0.86
CACTIN-204ENST00000585942 RAD54LQ92698 747 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms