RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 SYNE3Q6ZMZ3 975 aa25.02■■□□□ 1.6
CIRBP-205ENST00000585913 SGMS1Q86VZ5 419 aa25.02■■□□□ 1.6
CIRBP-205ENST00000585913 RAB11FIP4Q86YS3 637 aa25.02■■□□□ 1.6
CIRBP-205ENST00000585913 AFG1LQ8WV93 481 aa25.02■■□□□ 1.6
CIRBP-205ENST00000585913 DDX41Q9UJV9 622 aaKnown RBP25.02■■□□□ 1.6
CIRBP-205ENST00000585913 SCN10AQ9Y5Y9 1956 aa25.02■■□□□ 1.6
CIRBP-205ENST00000585913 COL6A3P12111 3177 aa25.01■■□□□ 1.59
CIRBP-205ENST00000585913 CSF2RAP15509 400 aa25.01■■□□□ 1.59
CIRBP-205ENST00000585913 CCND2P30279 289 aa25.01■■□□□ 1.59
CIRBP-205ENST00000585913 KRT32Q14532 448 aa25.01■■□□□ 1.59
CIRBP-205ENST00000585913 VSIG10LQ86VR7 867 aa25.01■■□□□ 1.59
CIRBP-205ENST00000585913 MICU3Q86XE3 530 aa25.01■■□□□ 1.59
CIRBP-205ENST00000585913 SRBD1Q8N5C6 995 aaKnown RBP25.01■■□□□ 1.59
CIRBP-205ENST00000585913 MMP3P08254 477 aa25■■□□□ 1.59
CIRBP-205ENST00000585913 SUPT20HL2P0C7V6 817 aa25■■□□□ 1.59
CIRBP-205ENST00000585913 NBPF20Q3BBV1 942 aa25■■□□□ 1.59
CIRBP-205ENST00000585913 TSGA10IPQ3SY00 556 aa25■■□□□ 1.59
CIRBP-205ENST00000585913 KCNV1Q6PIU1 500 aa25■■□□□ 1.59
CIRBP-205ENST00000585913 RASEFQ8IZ41 740 aa25■■□□□ 1.59
CIRBP-205ENST00000585913 CMTR1Q8N1G2 835 aaKnown RBP25■■□□□ 1.59
CIRBP-205ENST00000585913 IL31RAQ8NI17 732 aa25■■□□□ 1.59
CIRBP-205ENST00000585913 CUL5Q93034 780 aa25■■□□□ 1.59
CIRBP-205ENST00000585913 LAMA2P24043 3122 aaKnown RBP24.99■■□□□ 1.59
CIRBP-205ENST00000585913 SMAD3P84022 425 aaKnown RBP24.99■■□□□ 1.59
CIRBP-205ENST00000585913 FAM109BQ6ICB4 259 aaPredicted RBP24.99■■□□□ 1.59
CIRBP-205ENST00000585913 NFRKBQ6P4R8 1299 aa24.99■■□□□ 1.59
CIRBP-205ENST00000585913 DHX32Q7L7V1 743 aaKnown RBP24.99■■□□□ 1.59
CIRBP-205ENST00000585913 FANCBQ8NB91 859 aa24.99■■□□□ 1.59
CIRBP-205ENST00000585913 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.99■■□□□ 1.594e-8■■□□□ 13.3
CIRBP-205ENST00000585913 NOC4LQ9BVI4 516 aaKnown RBP24.99■■□□□ 1.59
CIRBP-205ENST00000585913 TRMT13Q9NUP7 481 aaKnown RBP24.99■■□□□ 1.59
CIRBP-205ENST00000585913 UMODL1Q5DID0 1318 aa24.98■■□□□ 1.59
CIRBP-205ENST00000585913 CASTP20810 708 aaKnown RBP24.98■■□□□ 1.59
CIRBP-205ENST00000585913 CHMP4BP1P59074 171 aa24.98■■□□□ 1.59
CIRBP-205ENST00000585913 LAMC2Q13753 1193 aa24.98■■□□□ 1.59
CIRBP-205ENST00000585913 ADCK5Q3MIX3 580 aa24.98■■□□□ 1.59
CIRBP-205ENST00000585913 ZNF697Q5TEC3 545 aa24.98■■□□□ 1.59
CIRBP-205ENST00000585913 PSRC1Q6PGN9 363 aaPredicted RBP24.98■■□□□ 1.59
CIRBP-205ENST00000585913 DHX37Q8IY37 1157 aaKnown RBP24.98■■□□□ 1.59
CIRBP-205ENST00000585913 SMARCC2Q8TAQ2 1214 aa24.98■■□□□ 1.59
CIRBP-205ENST00000585913 EMID1Q96A84 441 aaPredicted RBP24.98■■□□□ 1.59
CIRBP-205ENST00000585913 TCEANC2Q96MN5 208 aa24.98■■□□□ 1.59
CIRBP-205ENST00000585913 MTMR10Q9NXD2 777 aa24.98■■□□□ 1.59
CIRBP-205ENST00000585913 RGS20O76081 388 aa24.97■■□□□ 1.59
CIRBP-205ENST00000585913 CCL23P55773 120 aa24.97■■□□□ 1.59
CIRBP-205ENST00000585913 EXOSC10Q01780 885 aaKnown RBP24.97■■□□□ 1.59
CIRBP-205ENST00000585913 PTPN11Q06124 597 aaPredicted RBP24.97■■□□□ 1.59
CIRBP-205ENST00000585913 DGKDQ16760 1214 aa24.97■■□□□ 1.59
CIRBP-205ENST00000585913 TMEM240Q5SV17 173 aa24.97■■□□□ 1.59
CIRBP-205ENST00000585913 APOA5Q6Q788 366 aa24.97■■□□□ 1.59
CIRBP-205ENST00000585913 TMTC3Q6ZXV5 915 aa24.97■■□□□ 1.59
CIRBP-205ENST00000585913 CCDC82Q8N4S0 544 aa24.97■■□□□ 1.59
CIRBP-205ENST00000585913 IL23AQ9NPF7 189 aa24.97■■□□□ 1.59
CIRBP-205ENST00000585913 MYH7BA7E2Y1 1941 aa24.96■■□□□ 1.59
CIRBP-205ENST00000585913 FRMPD4Q14CM0 1322 aa24.96■■□□□ 1.59
CIRBP-205ENST00000585913 HMGB1P09429 215 aaKnown RBP24.96■■□□□ 1.59
CIRBP-205ENST00000585913 ACRP10323 421 aa24.96■■□□□ 1.59
CIRBP-205ENST00000585913 CYP2C9P11712 490 aa24.96■■□□□ 1.59
CIRBP-205ENST00000585913 PPP1R13LQ8WUF5 828 aa24.96■■□□□ 1.59
CIRBP-205ENST00000585913 ZFP91Q96JP5 570 aaPredicted RBP24.96■■□□□ 1.59
CIRBP-205ENST00000585913 RBM28Q9NW13 759 aaKnown RBP24.96■■□□□ 1.59
CIRBP-205ENST00000585913 STAM2O75886 525 aa24.95■■□□□ 1.58
CIRBP-205ENST00000585913 TGFB3P10600 412 aa24.95■■□□□ 1.58
CIRBP-205ENST00000585913 GNPTABQ3T906 1256 aa24.95■■□□□ 1.58
CIRBP-205ENST00000585913 USP17L6PQ6QN14 398 aa24.95■■□□□ 1.58
CIRBP-205ENST00000585913 C16orf59Q7L2K0 433 aa24.95■■□□□ 1.58
CIRBP-205ENST00000585913 PPTC7Q8NI37 304 aa24.95■■□□□ 1.58
CIRBP-205ENST00000585913 WNT8AQ9H1J5 351 aa24.95■■□□□ 1.58
CIRBP-205ENST00000585913 NOD1Q9Y239 953 aa24.95■■□□□ 1.58
CIRBP-205ENST00000585913 hCG_1642624A0A1W2PR95 340 aa24.94■■□□□ 1.58
CIRBP-205ENST00000585913 PIK3CDO00329 1044 aa24.94■■□□□ 1.58
CIRBP-205ENST00000585913 ZBTB43O43298 467 aa24.94■■□□□ 1.58
CIRBP-205ENST00000585913 GGPS1O95749 300 aa24.94■■□□□ 1.58
CIRBP-205ENST00000585913 CELF3Q5SZQ8 465 aaKnown RBP24.94■■□□□ 1.58
CIRBP-205ENST00000585913 ZNF365Q70YC5 407 aa24.94■■□□□ 1.58
CIRBP-205ENST00000585913 FAM161BQ96MY7 647 aa24.94■■□□□ 1.58
CIRBP-205ENST00000585913 KATNAL1Q9BW62 490 aa24.94■■□□□ 1.58
CIRBP-205ENST00000585913 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.93■■□□□ 1.58
CIRBP-205ENST00000585913 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.93■■□□□ 1.58
CIRBP-205ENST00000585913 MEIS2O14770 477 aa24.93■■□□□ 1.58
CIRBP-205ENST00000585913 SORBS3O60504 671 aa24.93■■□□□ 1.58
CIRBP-205ENST00000585913 UBA1P22314 1058 aaKnown RBP24.93■■□□□ 1.58
CIRBP-205ENST00000585913 MRPS9P82933 396 aaKnown RBP24.93■■□□□ 1.58
CIRBP-205ENST00000585913 FGD1P98174 961 aa24.93■■□□□ 1.58
CIRBP-205ENST00000585913 RTN1Q16799 776 aa24.93■■□□□ 1.58
CIRBP-205ENST00000585913 MYSM1Q5VVJ2 828 aa24.93■■□□□ 1.58
CIRBP-205ENST00000585913 SPATA33Q96N06 139 aa24.93■■□□□ 1.58
CIRBP-205ENST00000585913 MTIF3Q9H2K0 278 aaKnown RBP24.93■■□□□ 1.58
CIRBP-205ENST00000585913 PSTPIP2Q9H939 334 aa24.93■■□□□ 1.58
CIRBP-205ENST00000585913 CNTNAP5Q8WYK1 1306 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 REC8O95072 547 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 HSPA4P34932 840 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 HEATR3Q7Z4Q2 680 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 RPUSD2Q8IZ73 545 aaKnown RBP24.92■■□□□ 1.58
CIRBP-205ENST00000585913 KAT2BQ92831 832 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 SCLYQ96I15 445 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 MLXIPQ9HAP2 919 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 BRPF3Q9ULD4 1205 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 STXBP5LQ9Y2K9 1186 aa24.92■■□□□ 1.58
CIRBP-205ENST00000585913 KLF18A0A0U1RQI7 1052 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms