RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 MSCO60682 206 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 AKR1A1P14550 325 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 TRIM32Q13049 653 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 NR5A1Q13285 461 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 KCNV1Q6PIU1 500 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 PIK3AP1Q6ZUJ8 805 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 IL31RAQ8NI17 732 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 SCFD2Q8WU76 684 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 ZNF333Q96JL9 665 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 CDHR1Q96JP9 859 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 SEPT4O43236 478 aa16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 CYP3A4P08684 503 aa16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 USP11P51784 963 aa16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 TTLL4Q14679 1199 aa16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 PRAMEF19Q5SWL8 479 aa16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 COL13A1Q5TAT6 717 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 IQSEC1Q6DN90 963 aa16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 SEPT14Q6ZU15 432 aa16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 NOL7Q9UMY1 257 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-209ENST00000585335 MCM3APO60318 1980 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 LRRC37A2A6NM11 1700 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 ADAMTS3O15072 1205 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 ZNF865P0CJ78 1059 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 CCL5P13501 91 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 SYT1P21579 422 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 SETQ01105 290 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 INF2Q27J81 1249 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 CCDC144BQ3MJ40 725 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 NEK8Q86SG6 692 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 NOSTRINQ8IVI9 506 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 GPRASP2Q96D09 838 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 MXRA8Q9BRK3 442 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 KATNBL1Q9H079 304 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 RNF208Q9H0X6 261 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 RTEL1Q9NZ71 1219 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-209ENST00000585335 NKRFO15226 690 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 MAFGO15525 162 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 FIBPO43427 364 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 STX6O43752 255 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 RARBP10826 455 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 GCFC2P16383 781 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 U2AF2P26368 475 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 CCND3P30281 292 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 TNFAIP2Q03169 654 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 MTMR1Q13613 665 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 CEP55Q53EZ4 464 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 NIPA1Q7RTP0 329 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 TNFRSF25Q93038 417 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 INPP4AQ96PE3 977 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 WDR11Q9BZH6 1224 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 UNC93B1Q9H1C4 597 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 JADE2Q9NQC1 790 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 UBIAD1Q9Y5Z9 338 aa16.59■□□□□ 0.25
SCAMP4-209ENST00000585335 RBM47A0AV96 593 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 TXNP10599 105 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 TGFB3P10600 412 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 ADCYAP1R1P41586 468 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 LETM2Q2VYF4 491 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 TAPT1Q6NXT6 567 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 MOXD1Q6UVY6 613 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 BRAPQ7Z569 592 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 TNS4Q8IZW8 715 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 CRYGNQ8WXF5 182 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 SPC25Q9HBM1 224 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 TSHZ2Q9NRE2 1034 aa16.58■□□□□ 0.24
SCAMP4-209ENST00000585335 CAPN2P17655 700 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 ICAM3P32942 547 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 CIITAP33076 1130 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 TRAPPC10P48553 1259 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 MTFR1Q15390 333 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 DUSP28Q4G0W2 176 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 PLA2G4DQ86XP0 818 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 GIMAP8Q8ND71 665 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 AP5M1Q9H0R1 490 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 PAK6Q9NQU5 681 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 PDGFCQ9NRA1 345 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 TCEAL9Q9UHQ7 104 aa16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 RBM19Q9Y4C8 960 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-209ENST00000585335 SPATA31C2B4DYI2 1134 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 MEIS1O00470 390 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 DUSP11O75319 330 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 ITGB5P18084 799 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 NEDD9Q14511 834 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 PRR16Q569H4 304 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 BRDTQ58F21 947 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 PPP4R3AQ6IN85 833 aa16.56■□□□□ 0.24
SCAMP4-209ENST00000585335 ZFP91Q96JP5 570 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms