RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 CTCFLQ8NI51 663 aaPredicted RBP20.66■□□□□ 0.9
ERBB2-221ENST00000584888 COPS5Q92905 334 aa20.66■□□□□ 0.9
ERBB2-221ENST00000584888 ALDH8A1Q9H2A2 487 aaPredicted RBP20.66■□□□□ 0.9
ERBB2-221ENST00000584888 MAP3K20Q9NYL2 800 aaKnown RBP20.66■□□□□ 0.9
ERBB2-221ENST00000584888 KIAA1217Q5T5P2 1943 aa20.65■□□□□ 0.9
ERBB2-221ENST00000584888 REC8O95072 547 aa20.65■□□□□ 0.9
ERBB2-221ENST00000584888 PLEKHA8P1O95397 391 aa20.65■□□□□ 0.9
ERBB2-221ENST00000584888 TXNP10599 105 aaKnown RBP20.65■□□□□ 0.9
ERBB2-221ENST00000584888 TRAF1Q13077 416 aa20.65■□□□□ 0.9
ERBB2-221ENST00000584888 BRDTQ58F21 947 aaPredicted RBP20.65■□□□□ 0.9
ERBB2-221ENST00000584888 HOMER1Q86YM7 354 aa20.65■□□□□ 0.9
ERBB2-221ENST00000584888 TCEANC2Q96MN5 208 aa20.65■□□□□ 0.9
ERBB2-221ENST00000584888 MTG1Q9BT17 334 aaPredicted RBP20.65■□□□□ 0.9
ERBB2-221ENST00000584888 SLC12A7Q9Y666 1083 aa20.65■□□□□ 0.9
ERBB2-221ENST00000584888 A6NJR5 290 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 GRXCR1A8MXD5 290 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 KPNA6O60684 536 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 ARIH2O95376 493 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 FGBP02675 491 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 HMGB1P09429 215 aaKnown RBP20.64■□□□□ 0.89
ERBB2-221ENST00000584888 RXRAP19793 462 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 TTLL4Q14679 1199 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.64■□□□□ 0.89
ERBB2-221ENST00000584888 FANCBQ8NB91 859 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 MAFAQ8NHW3 353 aaPredicted RBP20.64■□□□□ 0.89
ERBB2-221ENST00000584888 NSUN6Q8TEA1 469 aaKnown RBP20.64■□□□□ 0.89
ERBB2-221ENST00000584888 HERVK_113Q902F9 699 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 TIFAQ96CG3 184 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 IWS1Q96ST2 819 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 WNT8AQ9H1J5 351 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 TRMT13Q9NUP7 481 aaKnown RBP20.64■□□□□ 0.89
ERBB2-221ENST00000584888 BRPF3Q9ULD4 1205 aa20.64■□□□□ 0.89
ERBB2-221ENST00000584888 CFBP00751 764 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 SUPT20HL2P0C7V6 817 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 PBX2P40425 430 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 GRIN2CQ14957 1233 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 NBPF20Q3BBV1 942 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 CCDC62Q6P9F0 684 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 APOA5Q6Q788 366 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 RMDN3Q96TC7 470 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 USP26Q9BXU7 913 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 ZNF576Q9H609 170 aa20.63■□□□□ 0.89
ERBB2-221ENST00000584888 CYP2C9P11712 490 aa20.62■□□□□ 0.89
ERBB2-221ENST00000584888 FOSL2P15408 326 aa20.62■□□□□ 0.89
ERBB2-221ENST00000584888 FAM47CQ5HY64 1035 aa20.62■□□□□ 0.89
ERBB2-221ENST00000584888 SEPT14Q6ZU15 432 aa20.62■□□□□ 0.89
ERBB2-221ENST00000584888 TMTC3Q6ZXV5 915 aa20.62■□□□□ 0.89
ERBB2-221ENST00000584888 FBXL16Q8N461 479 aa20.62■□□□□ 0.89
ERBB2-221ENST00000584888 RRP36Q96EU6 259 aaKnown RBP20.62■□□□□ 0.89
ERBB2-221ENST00000584888 PBX4Q9BYU1 374 aa20.62■□□□□ 0.89
ERBB2-221ENST00000584888 CXXC1Q9P0U4 656 aaPredicted RBP20.62■□□□□ 0.89
ERBB2-221ENST00000584888 CPA1P15085 419 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 FUT2Q10981 343 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 STXBP2Q15833 593 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 OTOP2Q7RTS6 562 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 RAB11FIP4Q86YS3 637 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 RPUSD2Q8IZ73 545 aaKnown RBP20.61■□□□□ 0.89
ERBB2-221ENST00000584888 CMTR1Q8N1G2 835 aaKnown RBP20.61■□□□□ 0.89
ERBB2-221ENST00000584888 PPP1R13LQ8WUF5 828 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 SCLYQ96I15 445 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 AGXT2Q9BYV1 514 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 MTIF3Q9H2K0 278 aaKnown RBP20.61■□□□□ 0.89
ERBB2-221ENST00000584888 PXMP2Q9NR77 195 aa20.61■□□□□ 0.89
ERBB2-221ENST00000584888 A0A0C4DFX4 3053 aa20.6■□□□□ 0.89
ERBB2-221ENST00000584888 NR3C2P08235 984 aa20.6■□□□□ 0.89
ERBB2-221ENST00000584888 RCAN1P53805 252 aa20.6■□□□□ 0.89
ERBB2-221ENST00000584888 LY6KQ17RY6 165 aa20.6■□□□□ 0.89
ERBB2-221ENST00000584888 ARHGEF16Q5VV41 709 aa20.6■□□□□ 0.89
ERBB2-221ENST00000584888 NFRKBQ6P4R8 1299 aa20.6■□□□□ 0.89
ERBB2-221ENST00000584888 PIBF1Q8WXW3 757 aa20.6■□□□□ 0.89
ERBB2-221ENST00000584888 VWCEQ96DN2 955 aa20.6■□□□□ 0.89
ERBB2-221ENST00000584888 JAKMIP1Q96N16 626 aaKnown RBP20.6■□□□□ 0.89
ERBB2-221ENST00000584888 FAM217BQ9NTX9 383 aaPredicted RBP20.6■□□□□ 0.89
ERBB2-221ENST00000584888 GCOM1H8Y6P7 765 aaPredicted RBP20.59■□□□□ 0.89
ERBB2-221ENST00000584888 GH1P01241 217 aa20.59■□□□□ 0.89
ERBB2-221ENST00000584888 POLR2MP0CAP2 368 aa20.59■□□□□ 0.89
ERBB2-221ENST00000584888 EIF2AK2P19525 551 aaKnown RBP20.59■□□□□ 0.89
ERBB2-221ENST00000584888 HOXA13P31271 388 aaPredicted RBP20.59■□□□□ 0.89
ERBB2-221ENST00000584888 SYNE3Q6ZMZ3 975 aa20.59■□□□□ 0.89
ERBB2-221ENST00000584888 MICU3Q86XE3 530 aa20.59■□□□□ 0.89
ERBB2-221ENST00000584888 AFG1LQ8WV93 481 aa20.59■□□□□ 0.89
ERBB2-221ENST00000584888 PDCD2LQ9BRP1 358 aa20.59■□□□□ 0.89
ERBB2-221ENST00000584888 SCN10AQ9Y5Y9 1956 aa20.59■□□□□ 0.89
ERBB2-221ENST00000584888 ZBTB43O43298 467 aa20.58■□□□□ 0.89
ERBB2-221ENST00000584888 EIF3JO75822 258 aaKnown RBP20.58■□□□□ 0.89
ERBB2-221ENST00000584888 RPS6KB1P23443 525 aa20.58■□□□□ 0.89
ERBB2-221ENST00000584888 PTPN11Q06124 597 aaPredicted RBP20.58■□□□□ 0.89
ERBB2-221ENST00000584888 ARHGAP1Q07960 439 aa20.58■□□□□ 0.89
ERBB2-221ENST00000584888 BLOC1S2Q6QNY1 142 aa20.58■□□□□ 0.89
ERBB2-221ENST00000584888 Q6ZUG5 572 aa20.58■□□□□ 0.89
ERBB2-221ENST00000584888 VSIG10LQ86VR7 867 aa20.58■□□□□ 0.89
ERBB2-221ENST00000584888 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
ERBB2-221ENST00000584888 MSRAQ9UJ68 235 aa20.58■□□□□ 0.89
ERBB2-221ENST00000584888 FRMPD4Q14CM0 1322 aa20.57■□□□□ 0.88
ERBB2-221ENST00000584888 CHMP4BP1P59074 171 aa20.57■□□□□ 0.88
ERBB2-221ENST00000584888 RAB30Q15771 203 aa20.57■□□□□ 0.88
ERBB2-221ENST00000584888 DDX41Q9UJV9 622 aaKnown RBP20.57■□□□□ 0.88
ERBB2-221ENST00000584888 MYH7BA7E2Y1 1941 aa20.57■□□□□ 0.88
ERBB2-221ENST00000584888 CNTNAP5Q8WYK1 1306 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 KLF18A0A0U1RQI7 1052 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms