RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 RASGRF1Q13972 1273 aa5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 BMS1Q14692 1282 aaKnown RBP5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 ZC3H12BQ5HYM0 836 aaKnown RBP5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 TTLL10Q6ZVT0 673 aa5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 ADGRG2Q8IZP9 1017 aa5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 RCBTB1Q8NDN9 531 aa5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 CCDC140Q96MF4 163 aa5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 DEPDC7Q96QD5 511 aa5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 MMP19Q99542 508 aa5.31□□□□□ -1.56
PPP4R1-229ENST00000584754 BLACEA4D250 179 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 C22orf46C9J442 243 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 IRS4O14654 1257 aaPredicted RBP5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 PDPK1O15530 556 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 SMARCA5O60264 1052 aaPredicted RBP5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 ASGR2P07307 311 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 PFKLP17858 780 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 BMP7P18075 431 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 FBLN1P23142 703 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 PMLP29590 882 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 GFRA1P56159 465 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 TARBP2Q15633 366 aaKnown RBP5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 YOD1Q5VVQ6 348 aaPredicted RBP5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 CNKSR3Q6P9H4 555 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 CEP68Q76N32 757 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 FAM129CQ86XR2 697 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 PPIL6Q8IXY8 311 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 ALG3Q92685 438 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 DIO2Q92813 273 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 DACT3Q96B18 629 aaPredicted RBP5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 PWWP2AQ96N64 755 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 IER2Q9BTL4 223 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 MSRB2Q9Y3D2 182 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 PCDHA2Q9Y5H9 948 aa5.3□□□□□ -1.56
PPP4R1-229ENST00000584754 IRS2Q9Y4H2 1338 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 LOC105371045A0A1W2PR82 267 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 MEFVO15553 781 aaPredicted RBP5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 CAPNS1P04632 268 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 INHBBP09529 407 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 AFF3P51826 1226 aaKnown RBP5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 CTSWP56202 376 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 WWC2Q6AWC2 1192 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 NLRP10Q86W26 655 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 AMIGO3Q86WK7 504 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 NLGN1Q8N2Q7 840 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 SYNPOQ8N3V7 929 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 C1orf159Q96HA4 380 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 CHAMP1Q96JM3 812 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 SNTG2Q9NY99 539 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 TIMM13Q9Y5L4 95 aaPredicted RBP5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 CADPSQ9ULU8 1353 aa5.29□□□□□ -1.56
PPP4R1-229ENST00000584754 ERCC6Q03468 1493 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 A0A1B0GTL3 188 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 SGSM2O43147 1006 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 PRODHO43272 600 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 MYO1BO43795 1136 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 DLX3O60479 287 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 MSCO60682 206 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 CPP00450 1065 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 SCG5P05408 212 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 IGFBP6P24592 240 aaPredicted RBP5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 HSD3B2P26439 372 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 FOXO4P98177 505 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 LONRF2Q1L5Z9 754 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 MTERF2Q49AM1 385 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 TCERG1LQ5VWI1 586 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 SPATC1Q76KD6 591 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 LRRC47Q8N1G4 583 aaKnown RBP5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 FAM26EQ8N5C1 309 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 PEX11GQ96HA9 241 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 PFDN2Q9UHV9 154 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 FAN1Q9Y2M0 1017 aa5.28□□□□□ -1.56
PPP4R1-229ENST00000584754 CCDC163A0A0D9SF12 145 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 TRIM13O60858 407 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 PLA2G1BP04054 148 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 GTF2A2P52657 109 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 RPL11P62913 178 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 RASA3Q14644 834 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 SLC9A5Q14940 896 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 SLC35F1Q5T1Q4 408 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 SDE2Q6IQ49 451 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 GIMAP6Q6P9H5 292 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 KCNT2Q6UVM3 1135 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 USP53Q70EK8 1073 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 STK32CQ86UX6 486 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 FAM177A1Q8N128 213 aaPredicted RBP5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 SYT8Q8NBV8 401 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 TRMT2BQ96GJ1 504 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 SGSM3Q96HU1 749 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 NOX5Q96PH1 765 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 SLKQ9H2G2 1235 aaPredicted RBP5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 ARHGEF4Q9NR80 690 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 PPARGC1AQ9UBK2 798 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 RAPGEFL1Q9UHV5 662 aa5.27□□□□□ -1.57
PPP4R1-229ENST00000584754 ENPP3O14638 875 aa5.26□□□□□ -1.57
PPP4R1-229ENST00000584754 ZBTB7AO95365 584 aa5.26□□□□□ -1.57
PPP4R1-229ENST00000584754 NCAM1P13591 858 aa5.26□□□□□ -1.57
PPP4R1-229ENST00000584754 LTBRP36941 435 aa5.26□□□□□ -1.57
PPP4R1-229ENST00000584754 E4F1Q66K89 784 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms