RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	AFAP1L1	Q8TED9	768 aa		10.3	□□□□□ -0.76
NUP85-223	ENST00000583877	SCFD2	Q8WU76	684 aa		10.3	□□□□□ -0.76
NUP85-223	ENST00000583877	PNMA2	Q9UL42	364 aa		10.3	□□□□□ -0.76
NUP85-223	ENST00000583877	NOD1	Q9Y239	953 aa		10.3	□□□□□ -0.76
NUP85-223	ENST00000583877	TTC41P	Q6P2S7	1318 aa		10.3	□□□□□ -0.76
NUP85-223	ENST00000583877		B4DLN1	442 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	ORC4	O43929	436 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	RANBP6	O60518	1105 aa	Known RBP	10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	PARN	O95453	639 aa	Known RBP	10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	CALML3	P27482	149 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	SLC16A2	P36021	539 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	MRPL12	P52815	198 aa	Known RBP	10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	CAMK2B	Q13554	666 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	TTBK2	Q6IQ55	1244 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	SLC30A10	Q6XR72	485 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	DNER	Q8NFT8	737 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	CAGE1	Q8TC20	777 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	CLEC4D	Q8WXI8	215 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	FSD1	Q9BTV5	496 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	INCENP	Q9NQS7	918 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	ANAPC4	Q9UJX5	808 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	MTMR7	Q9Y216	660 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	LOXHD1	Q8IVV2	1947 aa		10.29	□□□□□ -0.76
NUP85-223	ENST00000583877	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	LCHN	A4D1U4	455 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	HAX1	O00165	279 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	FOXP2	O15409	715 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	FGR	P09769	529 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	TXN	P10599	105 aa	Known RBP	10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	CLCN6	P51797	869 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	WDR5	P61964	334 aa	Known RBP	10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	RPS6	P62753	249 aa	Known RBP	10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	PTGIS	Q16647	500 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	SPRED2	Q7Z698	418 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	SESTD1	Q86VW0	696 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	PI4K2B	Q8TCG2	481 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	GDPD5	Q8WTR4	605 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	PPP1R13L	Q8WUF5	828 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	COPS5	Q92905	334 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	C11orf16	Q9NQ32	467 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	USP34	Q70CQ2	3546 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	WDR19	Q8NEZ3	1342 aa		10.28	□□□□□ -0.76
NUP85-223	ENST00000583877	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	PI4K2B	G5E9Z4	385 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	TOP1	P11387	765 aa	Known RBP	10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	SELP	P16109	830 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	RBL2	Q08999	1139 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	GPNMB	Q14956	572 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	GDF6	Q6KF10	455 aa	Predicted RBP	10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	CNKSR3	Q6P9H4	555 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	RGS22	Q8NE09	1264 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	CTAGE1	Q96RT6	745 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	RAD9A	Q99638	391 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	TMEM47	Q9BQJ4	181 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	ZBED2	Q9BTP6	218 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	MAF1	Q9H063	256 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	GPCPD1	Q9NPB8	672 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	TCP11L1	Q9NUJ3	509 aa		10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.27	□□□□□ -0.77
NUP85-223	ENST00000583877	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	FAM86C2P	A6NEL3	165 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	EFCAB14	O75071	495 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	ARIH2	O95376	493 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	GJB5	O95377	273 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	CXCL10	P02778	98 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	MMP3	P08254	477 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	PDHB	P11177	359 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	ERVK-21	P61565	698 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	DEFB103A	P81534	67 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	ALX1	Q15699	326 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	C20orf194	Q5TEA3	1177 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	SMYD5	Q6GMV2	418 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	CCDC62	Q6P9F0	684 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	LRRC8D	Q7L1W4	858 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	AFG1L	Q8WV93	481 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	TGS1	Q96RS0	853 aa	Known RBP	10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	UBE2Z	Q9H832	354 aa	Predicted RBP	10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	SUGCT	Q9HAC7	445 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	CD320	Q9NPF0	282 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	RCAN3	Q9UKA8	241 aa		10.26	□□□□□ -0.77
NUP85-223	ENST00000583877	NBN	O60934	754 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	GH1	P01241	217 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	CKB	P12277	381 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	CAST	P20810	708 aa	Known RBP	10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	CHMP4BP1	P59074	171 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	ARHGAP1	Q07960	439 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	ZNF543	Q08ER8	600 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	LEXM	Q3ZCV2	418 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	VPS53	Q5VIR6	699 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	FAM178B	Q8IXR5	827 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	DHX38	Q92620	1227 aa	Known RBP	10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	KAT2B	Q92831	832 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	TTC14	Q96N46	770 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	GTF2IRD1	Q9UHL9	959 aa		10.25	□□□□□ -0.77
NUP85-223	ENST00000583877	KIAA1671	Q9BY89	1806 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	LINC01553	A4QN01	128 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	PRR33	A8MZF0	331 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	SNHG28	P0DPA3	235 aa		10.24	□□□□□ -0.77

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