RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 TTLL4Q14679 1199 aa19.42■□□□□ 0.7
TSEN54-211ENST00000583818 SH3RF1Q7Z6J0 888 aa19.42■□□□□ 0.7
TSEN54-211ENST00000583818 VSIG10LQ86VR7 867 aa19.42■□□□□ 0.7
TSEN54-211ENST00000583818 SAMD3Q8N6K7 520 aa19.42■□□□□ 0.7
TSEN54-211ENST00000583818 CUL5Q93034 780 aa19.42■□□□□ 0.7
TSEN54-211ENST00000583818 PGBD1Q96JS3 809 aa19.42■□□□□ 0.7
TSEN54-211ENST00000583818 GLT1D1Q96MS3 346 aa19.42■□□□□ 0.7
TSEN54-211ENST00000583818 NID2Q14112 1375 aa19.42■□□□□ 0.7
TSEN54-211ENST00000583818 MYL3P08590 195 aa19.41■□□□□ 0.7
TSEN54-211ENST00000583818 CCND2P30279 289 aa19.41■□□□□ 0.7
TSEN54-211ENST00000583818 EVCP57679 992 aa19.41■□□□□ 0.7
TSEN54-211ENST00000583818 NKX3-2P78367 333 aa19.41■□□□□ 0.7
TSEN54-211ENST00000583818 MRPS9P82933 396 aaKnown RBP19.41■□□□□ 0.7
TSEN54-211ENST00000583818 RTEL1Q9NZ71 1219 aa19.41■□□□□ 0.7
TSEN54-211ENST00000583818 Q9Y3F1 56 aa19.41■□□□□ 0.7
TSEN54-211ENST00000583818 MRVI1Q9Y6F6 885 aa19.41■□□□□ 0.7
TSEN54-211ENST00000583818 CCDC196A0A1B0GTZ2 297 aa19.4■□□□□ 0.7
TSEN54-211ENST00000583818 PIK3CDO00329 1044 aa19.4■□□□□ 0.7
TSEN54-211ENST00000583818 ADAMTS3O15072 1205 aa19.4■□□□□ 0.7
TSEN54-211ENST00000583818 MDM2Q00987 491 aaPredicted RBP19.4■□□□□ 0.7
TSEN54-211ENST00000583818 NTRK3Q16288 839 aa19.4■□□□□ 0.7
TSEN54-211ENST00000583818 PKN1Q16512 942 aa19.4■□□□□ 0.7
TSEN54-211ENST00000583818 SLC26A6Q9BXS9 759 aa19.4■□□□□ 0.7
TSEN54-211ENST00000583818 FRMPD4Q14CM0 1322 aa19.4■□□□□ 0.7
TSEN54-211ENST00000583818 MAGEA10P43363 369 aaPredicted RBP19.39■□□□□ 0.69
TSEN54-211ENST00000583818 ANAPC15P60006 121 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 ARHGAP1Q07960 439 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 PFKFB3Q16875 520 aaPredicted RBP19.39■□□□□ 0.69
TSEN54-211ENST00000583818 AFG1LQ8WV93 481 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 BCAS3Q9H6U6 928 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 PDLIM7Q9NR12 457 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 TMEM260Q9NX78 707 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 BARHL2Q9NY43 387 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 RBM27Q9P2N5 1060 aaKnown RBP19.39■□□□□ 0.69
TSEN54-211ENST00000583818 DDX41Q9UJV9 622 aaKnown RBP19.39■□□□□ 0.69
TSEN54-211ENST00000583818 GRIN2DO15399 1336 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 TRIOBPQ9H2D6 2365 aa19.39■□□□□ 0.69
TSEN54-211ENST00000583818 A0A0U1RQG5 324 aaPredicted RBP19.38■□□□□ 0.69
TSEN54-211ENST00000583818 TRIM43BA6NCK2 446 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 SMCO2A6NFE2 343 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 NKRFO15226 690 aaKnown RBP eCLIP19.38■□□□□ 0.69
TSEN54-211ENST00000583818 ZEB2O60315 1214 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 GH1P01241 217 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 SCG2P13521 617 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 CPT1AP50416 773 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 AK2P54819 239 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 SP2Q02086 613 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 TRIM43Q96BQ3 446 aaPredicted RBP19.38■□□□□ 0.69
TSEN54-211ENST00000583818 TPCN1Q9ULQ1 816 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 PCDHA6Q9UN73 950 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 PCDHA8Q9Y5H6 950 aa19.38■□□□□ 0.69
TSEN54-211ENST00000583818 ELP1O95163 1332 aa19.37■□□□□ 0.69
TSEN54-211ENST00000583818 ARVCFO00192 962 aa19.37■□□□□ 0.69
TSEN54-211ENST00000583818 PRPF3O43395 683 aaKnown RBP19.37■□□□□ 0.69
TSEN54-211ENST00000583818 ADCY7P51828 1080 aa19.37■□□□□ 0.69
TSEN54-211ENST00000583818 CHMP4BP1P59074 171 aa19.37■□□□□ 0.69
TSEN54-211ENST00000583818 PURAQ00577 322 aaKnown RBP19.37■□□□□ 0.69
TSEN54-211ENST00000583818 ITGA7Q13683 1181 aa19.37■□□□□ 0.69
TSEN54-211ENST00000583818 C1orf53Q5VUE5 145 aa19.37■□□□□ 0.69
TSEN54-211ENST00000583818 ZNF274Q96GC6 653 aaPredicted RBP19.37■□□□□ 0.69
TSEN54-211ENST00000583818 RIC8AQ9NPQ8 531 aa19.37■□□□□ 0.69
TSEN54-211ENST00000583818 MYH7BA7E2Y1 1941 aa19.37■□□□□ 0.69
TSEN54-211ENST00000583818 SPDYE3A6NKU9 549 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 CLTBP09497 229 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 IFNAR1P17181 557 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 UBA1P22314 1058 aaKnown RBP19.36■□□□□ 0.69
TSEN54-211ENST00000583818 ITGB8P26012 769 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 CDK7P50613 346 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 FAAP100Q0VG06 881 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 SEMA3FQ13275 785 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 PPP1R18Q6NYC8 613 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 GDF15Q99988 308 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 PRKAG2Q9UGJ0 569 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 DOCK5Q9H7D0 1870 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 LTBP2Q14767 1821 aa19.36■□□□□ 0.69
TSEN54-211ENST00000583818 A6NJR5 290 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 GGPS1O95749 300 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 MMP3P08254 477 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 NEK4P51957 841 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 AKAP17AQ02040 695 aaKnown RBP19.35■□□□□ 0.69
TSEN54-211ENST00000583818 SCRN1Q12765 414 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 HABP4Q5JVS0 413 aaKnown RBP19.35■□□□□ 0.69
TSEN54-211ENST00000583818 PCNX4Q63HM2 1172 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 DHX37Q8IY37 1157 aaKnown RBP19.35■□□□□ 0.69
TSEN54-211ENST00000583818 PRO3102Q9H379 93 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 POLR3EQ9NVU0 708 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 VPS54Q9P1Q0 977 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 TELO2Q9Y4R8 837 aa19.35■□□□□ 0.69
TSEN54-211ENST00000583818 DCDC2CA8MYV0 355 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 CPLX1O14810 134 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 CABYRO75952 493 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 LARGE1O95461 756 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 JAKMIP3Q5VZ66 844 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 ANKRD33Q7Z3H0 272 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 RASGRP4Q8TDF6 673 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 BADQ92934 168 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 IL17RAQ96F46 866 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 AIFM3Q96NN9 605 aa19.34■□□□□ 0.69
TSEN54-211ENST00000583818 INPP4AQ96PE3 977 aaPredicted RBP19.34■□□□□ 0.69
TSEN54-211ENST00000583818 MTG1Q9BT17 334 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms