RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 LY6KQ17RY6 165 aa23.91■■□□□ 1.42
SRSF1-206ENST00000583741 AAK1Q2M2I8 961 aa23.91■■□□□ 1.42
SRSF1-206ENST00000583741 GPATCH4Q5T3I0 446 aaKnown RBP23.91■■□□□ 1.42
SRSF1-206ENST00000583741 COL20A1Q9P218 1284 aa23.91■■□□□ 1.42
SRSF1-206ENST00000583741 B4DLN1 442 aa23.9■■□□□ 1.42
SRSF1-206ENST00000583741 PCP11498 1178 aaKnown RBP23.9■■□□□ 1.42
SRSF1-206ENST00000583741 MRPL12P52815 198 aaKnown RBP23.9■■□□□ 1.42
SRSF1-206ENST00000583741 ARHGAP1Q07960 439 aa23.9■■□□□ 1.42
SRSF1-206ENST00000583741 CDC37Q16543 378 aaPredicted RBP23.9■■□□□ 1.42
SRSF1-206ENST00000583741 GDF6Q6KF10 455 aaPredicted RBP23.9■■□□□ 1.42
SRSF1-206ENST00000583741 TMCO2Q7Z6W1 182 aaPredicted RBP23.9■■□□□ 1.42
SRSF1-206ENST00000583741 KAT2BQ92831 832 aa23.9■■□□□ 1.42
SRSF1-206ENST00000583741 TAAR1Q96RJ0 339 aa23.9■■□□□ 1.42
SRSF1-206ENST00000583741 BACH2Q9BYV9 841 aa23.9■■□□□ 1.42
SRSF1-206ENST00000583741 BAIAP3O94812 1187 aa23.89■■□□□ 1.42
SRSF1-206ENST00000583741 SEPT14Q6ZU15 432 aa23.89■■□□□ 1.42
SRSF1-206ENST00000583741 SYTL5Q8TDW5 730 aaPredicted RBP23.89■■□□□ 1.42
SRSF1-206ENST00000583741 DHX38Q92620 1227 aaKnown RBP23.89■■□□□ 1.42
SRSF1-206ENST00000583741 LCHNA4D1U4 455 aa23.88■■□□□ 1.41
SRSF1-206ENST00000583741 WDR5P61964 334 aaKnown RBP23.88■■□□□ 1.41
SRSF1-206ENST00000583741 GRB10Q13322 594 aa23.88■■□□□ 1.41
SRSF1-206ENST00000583741 CHST3Q7LGC8 479 aa23.88■■□□□ 1.41
SRSF1-206ENST00000583741 SESTD1Q86VW0 696 aa23.88■■□□□ 1.41
SRSF1-206ENST00000583741 TICAM2Q86XR7 235 aa23.88■■□□□ 1.41
SRSF1-206ENST00000583741 CAGE1Q8TC20 777 aa23.88■■□□□ 1.41
SRSF1-206ENST00000583741 AFAP1L1Q8TED9 768 aa23.88■■□□□ 1.41
SRSF1-206ENST00000583741 ESR2Q92731 530 aa23.88■■□□□ 1.41
SRSF1-206ENST00000583741 RNF41Q9H4P4 317 aaPredicted RBP23.88■■□□□ 1.41
SRSF1-206ENST00000583741 KIF28PB7ZC32 967 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 TLL1O43897 1013 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 LPXNO60711 386 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 GH1P01241 217 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 DGKHQ86XP1 1220 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 PNMA1Q8ND90 353 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 ABCB11O95342 1321 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 MYH7BA7E2Y1 1941 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 CASC1Q6TDU7 716 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 ADGRF4Q8IZF3 695 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 CCDC155Q8N6L0 562 aa23.87■■□□□ 1.41
SRSF1-206ENST00000583741 NSUN6Q8TEA1 469 aaKnown RBP23.87■■□□□ 1.41
SRSF1-206ENST00000583741 SELPP16109 830 aa23.86■■□□□ 1.41
SRSF1-206ENST00000583741 KCNJ6P48051 423 aa23.86■■□□□ 1.41
SRSF1-206ENST00000583741 DEFB103AP81534 67 aa23.86■■□□□ 1.41
SRSF1-206ENST00000583741 TCTN1Q2MV58 587 aa23.86■■□□□ 1.41
SRSF1-206ENST00000583741 LRRC8DQ7L1W4 858 aa23.86■■□□□ 1.41
SRSF1-206ENST00000583741 RMDN3Q96TC7 470 aa23.86■■□□□ 1.41
SRSF1-206ENST00000583741 NBNO60934 754 aa23.85■■□□□ 1.41
SRSF1-206ENST00000583741 KDM4AO75164 1064 aa23.85■■□□□ 1.41
SRSF1-206ENST00000583741 QRICH1Q2TAL8 776 aa23.85■■□□□ 1.41
SRSF1-206ENST00000583741 GTF2IRD1Q9UHL9 959 aa23.85■■□□□ 1.41
SRSF1-206ENST00000583741 COG5Q9UP83 839 aa23.85■■□□□ 1.41
SRSF1-206ENST00000583741 CASTP20810 708 aaKnown RBP23.84■■□□□ 1.41
SRSF1-206ENST00000583741 RBL2Q08999 1139 aa23.84■■□□□ 1.41
SRSF1-206ENST00000583741 STXBP2Q15833 593 aa23.84■■□□□ 1.41
SRSF1-206ENST00000583741 MAF1Q9H063 256 aa23.84■■□□□ 1.41
SRSF1-206ENST00000583741 DDX41Q9UJV9 622 aaKnown RBP23.84■■□□□ 1.41
SRSF1-206ENST00000583741 ZNF213O14771 459 aa23.83■■□□□ 1.41
SRSF1-206ENST00000583741 CXCL10P02778 98 aa23.83■■□□□ 1.41
SRSF1-206ENST00000583741 CKBP12277 381 aa23.83■■□□□ 1.41
SRSF1-206ENST00000583741 EIF2AK2P19525 551 aaKnown RBP23.83■■□□□ 1.41
SRSF1-206ENST00000583741 GDPD5Q8WTR4 605 aa23.83■■□□□ 1.41
SRSF1-206ENST00000583741 IWS1Q96ST2 819 aa23.83■■□□□ 1.41
SRSF1-206ENST00000583741 KAT14Q9H8E8 782 aa23.83■■□□□ 1.41
SRSF1-206ENST00000583741 HDAC6Q9UBN7 1215 aa23.83■■□□□ 1.41
SRSF1-206ENST00000583741 SIP14410 1827 aa23.83■■□□□ 1.41
SRSF1-206ENST00000583741 B4E1Z4 1266 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 DGKDQ16760 1214 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 CNKSR3Q6P9H4 555 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 IQCA1Q86XH1 822 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 MCF2L2Q86YR7 1114 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 ENAHQ8N8S7 591 aaPredicted RBP23.82■■□□□ 1.4
SRSF1-206ENST00000583741 ANKS1AQ92625 1134 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 WNT8BQ93098 351 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 HLA-CQ95604 372 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 C1QTNF1Q9BXJ1 281 aa23.82■■□□□ 1.4
SRSF1-206ENST00000583741 ZNF286BP0CG31 522 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 CHMLP26374 656 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 PLA2G5P39877 138 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 PSEN2P49810 448 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 MFAP1P55081 439 aaKnown RBP23.81■■□□□ 1.4
SRSF1-206ENST00000583741 ASPRV1Q53RT3 343 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 ARHGEF16Q5VV41 709 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 TRAF7Q6Q0C0 670 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 FBXO11Q86XK2 927 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 C7orf31Q8N865 590 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 EMID1Q96A84 441 aaPredicted RBP23.81■■□□□ 1.4
SRSF1-206ENST00000583741 ZSCAN10Q96SZ4 725 aaPredicted RBP23.81■■□□□ 1.4
SRSF1-206ENST00000583741 ALG1Q9BT22 464 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 ZBED2Q9BTP6 218 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 EPHX3Q9H6B9 360 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 JMJD4Q9H9V9 463 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 OPLAHO14841 1288 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 F2P00734 622 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 VAT1LQ9HCJ6 419 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 PXMP2Q9NR77 195 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 MTUS1Q9ULD2 1270 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 MRPL11Q9Y3B7 192 aaKnown RBP23.81■■□□□ 1.4
SRSF1-206ENST00000583741 MRVI1Q9Y6F6 885 aa23.81■■□□□ 1.4
SRSF1-206ENST00000583741 HAS3O00219 553 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 HIP1O00291 1037 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms