RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NID2Q14112 1375 aa28.73■■■□□ 2.19
TSEN54-209ENST00000583454 GBF1Q92538 1859 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 LOC102724159A0A0B4J2E5 919 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 RBM47A0AV96 593 aaKnown RBP28.72■■■□□ 2.19
TSEN54-209ENST00000583454 GOLGA8AA7E2F4 631 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 GOLGA8BA8MQT2 603 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 CABYRO75952 493 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 CSF2RAP15509 400 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 RPS6P62753 249 aaKnown RBP28.72■■■□□ 2.19
TSEN54-209ENST00000583454 FUT2Q10981 343 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 PWP2Q15269 919 aaKnown RBP28.72■■■□□ 2.19
TSEN54-209ENST00000583454 TMEM240Q5SV17 173 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 RASIP1Q5U651 963 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 AP5M1Q9H0R1 490 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 ALDH8A1Q9H2A2 487 aaPredicted RBP28.72■■■□□ 2.19
TSEN54-209ENST00000583454 PDRG1Q9NUG6 133 aa28.72■■■□□ 2.19
TSEN54-209ENST00000583454 ADD3Q9UEY8 706 aaKnown RBP28.72■■■□□ 2.19
TSEN54-209ENST00000583454 SCN10AQ9Y5Y9 1956 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 PTPDC1A2A3K4 754 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 OPLAHO14841 1288 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 CDC27P30260 824 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 GHRHRQ02643 423 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 DUSP28Q4G0W2 176 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 MCF2L2Q86YR7 1114 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 PIBF1Q8WXW3 757 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 TBC1D5Q92609 795 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 PPP1R12CQ9BZL4 782 aa28.71■■■□□ 2.19
TSEN54-209ENST00000583454 TMEM265A0A087WTH1 108 aa28.7■■■□□ 2.18
TSEN54-209ENST00000583454 TLR3O15455 904 aaKnown RBP28.7■■■□□ 2.18
TSEN54-209ENST00000583454 EDNRBP24530 442 aa28.7■■■□□ 2.18
TSEN54-209ENST00000583454 METAP2P50579 478 aaKnown RBP eCLIP28.7■■■□□ 2.18
TSEN54-209ENST00000583454 PPIGQ13427 754 aaKnown RBP eCLIP28.7■■■□□ 2.182e-8■■■□□ 15.6
TSEN54-209ENST00000583454 ITGA7Q13683 1181 aa28.7■■■□□ 2.18
TSEN54-209ENST00000583454 CCDC82Q8N4S0 544 aa28.7■■■□□ 2.18
TSEN54-209ENST00000583454 MYLIPQ8WY64 445 aa28.7■■■□□ 2.18
TSEN54-209ENST00000583454 NAP1L2Q9ULW6 460 aaPredicted RBP28.7■■■□□ 2.18
TSEN54-209ENST00000583454 CCDC196A0A1B0GTZ2 297 aa28.69■■■□□ 2.18
TSEN54-209ENST00000583454 PDIA3P30101 505 aaKnown RBP28.69■■■□□ 2.18
TSEN54-209ENST00000583454 CYP2C18P33260 490 aa28.69■■■□□ 2.18
TSEN54-209ENST00000583454 SEC63Q9UGP8 760 aaKnown RBP28.69■■■□□ 2.18
TSEN54-209ENST00000583454 UMODL1Q5DID0 1318 aa28.69■■■□□ 2.18
TSEN54-209ENST00000583454 CNTNAP5Q8WYK1 1306 aa28.69■■■□□ 2.18
TSEN54-209ENST00000583454 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.68■■■□□ 2.18
TSEN54-209ENST00000583454 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.68■■■□□ 2.18
TSEN54-209ENST00000583454 CALML3P27482 149 aa28.68■■■□□ 2.18
TSEN54-209ENST00000583454 ADD1P35611 737 aaKnown RBP28.68■■■□□ 2.18
TSEN54-209ENST00000583454 PSMC6P62333 389 aa28.68■■■□□ 2.18
TSEN54-209ENST00000583454 SAMD3Q8N6K7 520 aa28.68■■■□□ 2.18
TSEN54-209ENST00000583454 ZNF274Q96GC6 653 aaPredicted RBP28.68■■■□□ 2.18
TSEN54-209ENST00000583454 KIAA1217Q5T5P2 1943 aa28.68■■■□□ 2.18
TSEN54-209ENST00000583454 DNAJB2P25686 324 aa28.67■■■□□ 2.18
TSEN54-209ENST00000583454 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.67■■■□□ 2.18
TSEN54-209ENST00000583454 TMEM199Q8N511 208 aa28.67■■■□□ 2.18
TSEN54-209ENST00000583454 SYTL5Q8TDW5 730 aaPredicted RBP28.67■■■□□ 2.18
TSEN54-209ENST00000583454 WDR11Q9BZH6 1224 aa28.67■■■□□ 2.18
TSEN54-209ENST00000583454 TRPV6Q9H1D0 765 aa28.67■■■□□ 2.18
TSEN54-209ENST00000583454 MAP3K20Q9NYL2 800 aaKnown RBP28.67■■■□□ 2.18
TSEN54-209ENST00000583454 ZEB2O60315 1214 aa28.66■■■□□ 2.18
TSEN54-209ENST00000583454 B4GALT4O60513 344 aa28.66■■■□□ 2.18
TSEN54-209ENST00000583454 ACRP10323 421 aa28.66■■■□□ 2.18
TSEN54-209ENST00000583454 HSD17B4P51659 736 aa28.66■■■□□ 2.18
TSEN54-209ENST00000583454 DNERQ8NFT8 737 aa28.66■■■□□ 2.18
TSEN54-209ENST00000583454 TRANK1O15050 2925 aa28.66■■■□□ 2.18
TSEN54-209ENST00000583454 MYO9BQ13459 2157 aa28.65■■■□□ 2.18
TSEN54-209ENST00000583454 ZNF365Q70YC5 407 aa28.65■■■□□ 2.18
TSEN54-209ENST00000583454 NOC4LQ9BVI4 516 aaKnown RBP28.65■■■□□ 2.18
TSEN54-209ENST00000583454 SEZ6LQ9BYH1 1024 aa28.65■■■□□ 2.18
TSEN54-209ENST00000583454 HIPK3Q9H422 1215 aa28.65■■■□□ 2.18
TSEN54-209ENST00000583454 COL20A1Q9P218 1284 aa28.65■■■□□ 2.18
TSEN54-209ENST00000583454 SCN5AQ14524 2016 aa28.64■■■□□ 2.18
TSEN54-209ENST00000583454 hCG_1642624A0A1W2PR95 340 aa28.64■■■□□ 2.18
TSEN54-209ENST00000583454 CFBP00751 764 aa28.64■■■□□ 2.18
TSEN54-209ENST00000583454 PURAQ00577 322 aaKnown RBP28.64■■■□□ 2.18
TSEN54-209ENST00000583454 MAFAQ8NHW3 353 aaPredicted RBP28.64■■■□□ 2.18
TSEN54-209ENST00000583454 VWCEQ96DN2 955 aa28.64■■■□□ 2.18
TSEN54-209ENST00000583454 WNT8AQ9H1J5 351 aa28.64■■■□□ 2.18
TSEN54-209ENST00000583454 IL23AQ9NPF7 189 aa28.64■■■□□ 2.18
TSEN54-209ENST00000583454 V9GY48 417 aaPredicted RBP28.64■■■□□ 2.18
TSEN54-209ENST00000583454 REV3LO60673 3130 aa28.63■■■□□ 2.17
TSEN54-209ENST00000583454 GRXCR1A8MXD5 290 aa28.63■■■□□ 2.17
TSEN54-209ENST00000583454 GRIN2CQ14957 1233 aa28.63■■■□□ 2.17
TSEN54-209ENST00000583454 NTRK3Q16288 839 aa28.63■■■□□ 2.17
TSEN54-209ENST00000583454 PSRC1Q6PGN9 363 aaPredicted RBP28.63■■■□□ 2.17
TSEN54-209ENST00000583454 LARP6Q9BRS8 491 aaKnown RBP28.63■■■□□ 2.17
TSEN54-209ENST00000583454 C22orf23Q9BZE7 217 aa28.63■■■□□ 2.17
TSEN54-209ENST00000583454 RBM25P49756 843 aaKnown RBP28.62■■■□□ 2.17
TSEN54-209ENST00000583454 ANKRD1Q15327 319 aa28.62■■■□□ 2.17
TSEN54-209ENST00000583454 TAAR1Q96RJ0 339 aa28.62■■■□□ 2.17
TSEN54-209ENST00000583454 KIF2CQ99661 725 aa28.62■■■□□ 2.17
TSEN54-209ENST00000583454 CXXC1Q9P0U4 656 aaPredicted RBP28.62■■■□□ 2.17
TSEN54-209ENST00000583454 TANC1Q9C0D5 1861 aa28.61■■■□□ 2.17
TSEN54-209ENST00000583454 PBX2P40425 430 aa28.61■■■□□ 2.17
TSEN54-209ENST00000583454 NEK4P51957 841 aa28.61■■■□□ 2.17
TSEN54-209ENST00000583454 CCT2P78371 535 aaKnown RBP28.61■■■□□ 2.17
TSEN54-209ENST00000583454 PDE4DQ08499 809 aa28.61■■■□□ 2.17
TSEN54-209ENST00000583454 HERVK_113Q902F9 699 aa28.61■■■□□ 2.17
TSEN54-209ENST00000583454 PBX4Q9BYU1 374 aa28.61■■■□□ 2.17
TSEN54-209ENST00000583454 POLR3EQ9NVU0 708 aa28.61■■■□□ 2.17
TSEN54-209ENST00000583454 GCOM1H8Y6P7 765 aaPredicted RBP28.6■■■□□ 2.17
TSEN54-209ENST00000583454 ARIH2O95376 493 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms