RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 SPRYD3Q8NCJ5 442 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 ANKS1AQ92625 1134 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 LLPHQ9BRT6 129 aaKnown RBP20.68■□□□□ 0.9
SNX11-212ENST00000583320 A1CFQ9NQ94 594 aaKnown RBP20.68■□□□□ 0.9
SNX11-212ENST00000583320 CHMP5Q9NZZ3 219 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 FBXO40Q9UH90 709 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 KLF18A0A0U1RQI7 1052 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 TSPY2A6NKD2 308 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 DYNC1LI2O43237 492 aaPredicted RBP20.67■□□□□ 0.9
SNX11-212ENST00000583320 GTPBP6O43824 516 aaPredicted RBP20.67■□□□□ 0.9
SNX11-212ENST00000583320 CYP2C9P11712 490 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 DEFB128Q7Z7B8 93 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 CCDC83Q8IWF9 413 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 ARNTL2Q8WYA1 636 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 CD320Q9NPF0 282 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 GPHNQ9NQX3 736 aaPredicted RBP20.67■□□□□ 0.9
SNX11-212ENST00000583320 TRMT13Q9NUP7 481 aaKnown RBP20.67■□□□□ 0.9
SNX11-212ENST00000583320 CLIP2Q9UDT6 1046 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 BRPF3Q9ULD4 1205 aa20.67■□□□□ 0.9
SNX11-212ENST00000583320 CTDP1Q9Y5B0 961 aaPredicted RBP20.67■□□□□ 0.9
SNX11-212ENST00000583320 CCDC69A6NI79 296 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 TFAP4Q01664 338 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 TAP1Q03518 808 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 ST3GAL1Q11201 340 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 FBXO16Q8IX29 292 aaPredicted RBP20.66■□□□□ 0.9
SNX11-212ENST00000583320 NEDD1Q8NHV4 660 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 COG5Q9UP83 839 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 TNKSO95271 1327 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 NID2Q14112 1375 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 PLIN4Q96Q06 1357 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 PTPRSQ13332 1948 aa20.66■□□□□ 0.9
SNX11-212ENST00000583320 ZNF536O15090 1300 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 DHX16O60231 1041 aaKnown RBP20.65■□□□□ 0.9
SNX11-212ENST00000583320 PDIA4P13667 645 aaKnown RBP20.65■□□□□ 0.9
SNX11-212ENST00000583320 OAZ1P54368 228 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 PPP2R5BQ15173 497 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 TAPT1Q6NXT6 567 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 APOA5Q6Q788 366 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 SYNE3Q6ZMZ3 975 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 NFXL1Q6ZNB6 911 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 EEPD1Q7L9B9 569 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 DGKHQ86XP1 1220 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 LRRC47Q8N1G4 583 aaKnown RBP20.65■□□□□ 0.9
SNX11-212ENST00000583320 ENAHQ8N8S7 591 aaPredicted RBP20.65■□□□□ 0.9
SNX11-212ENST00000583320 NECAB1Q8N987 351 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 AP5M1Q9H0R1 490 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 ACAD9Q9H845 621 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 FOXD4L1Q9NU39 408 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 FEM1BQ9UK73 627 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 SMC3Q9UQE7 1217 aa20.65■□□□□ 0.9
SNX11-212ENST00000583320 TANC1Q9C0D5 1861 aa20.64■□□□□ 0.9
SNX11-212ENST00000583320 GOLGA8BA8MQT2 603 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 LPXNO60711 386 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 GPR37L1O60883 481 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 TSPY3P0CV98 308 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 TSPY8P0CW00 308 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 SCRN1Q12765 414 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 GRB10Q13322 594 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 PPP1R13LQ8WUF5 828 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 RNF146Q9NTX7 359 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 SLC12A7Q9Y666 1083 aa20.64■□□□□ 0.89
SNX11-212ENST00000583320 TET1Q8NFU7 2136 aa20.63■□□□□ 0.89
SNX11-212ENST00000583320 RBAK-RBAKDNI3L0D1 243 aa20.63■□□□□ 0.89
SNX11-212ENST00000583320 ZBTB43O43298 467 aa20.63■□□□□ 0.89
SNX11-212ENST00000583320 NUCB2P80303 420 aa20.63■□□□□ 0.89
SNX11-212ENST00000583320 PPP4R3BQ5MIZ7 849 aa20.63■□□□□ 0.89
SNX11-212ENST00000583320 IFIT1BQ5T764 474 aaKnown RBP20.63■□□□□ 0.89
SNX11-212ENST00000583320 HLA-CQ95604 372 aa20.63■□□□□ 0.89
SNX11-212ENST00000583320 CEP95Q96GE4 821 aa20.63■□□□□ 0.89
SNX11-212ENST00000583320 PURBQ96QR8 312 aaKnown RBP20.63■□□□□ 0.89
SNX11-212ENST00000583320 ZKSCAN3Q9BRR0 538 aa20.63■□□□□ 0.89
SNX11-212ENST00000583320 ASB14A6NK59 587 aa20.62■□□□□ 0.89
SNX11-212ENST00000583320 PFKMP08237 780 aa20.62■□□□□ 0.89
SNX11-212ENST00000583320 NOVP48745 357 aa20.62■□□□□ 0.89
SNX11-212ENST00000583320 STK3Q13188 491 aa20.62■□□□□ 0.89
SNX11-212ENST00000583320 ALYREFQ86V81 257 aaKnown RBP20.62■□□□□ 0.89
SNX11-212ENST00000583320 SEZ6LQ9BYH1 1024 aa20.62■□□□□ 0.89
SNX11-212ENST00000583320 SENP2Q9HC62 589 aa20.62■□□□□ 0.89
SNX11-212ENST00000583320 ZEB2O60315 1214 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 DDAH1O94760 285 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 CALM1P0DP23 149 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 CALM2P0DP24 149 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 CALM3P0DP25 149 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 HMGN5P82970 282 aaKnown RBP20.61■□□□□ 0.89
SNX11-212ENST00000583320 HERC6Q8IVU3 1022 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 ZNF654Q8IZM8 581 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 GMCL1P1Q8NEA9 526 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 SMARCC2Q8TAQ2 1214 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 MKL1Q969V6 931 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 SLC9A7Q96T83 725 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 IL17RBQ9NRM6 502 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 MTMR4Q9NYA4 1195 aa20.61■□□□□ 0.89
SNX11-212ENST00000583320 NAP1L2Q9ULW6 460 aaPredicted RBP20.61■□□□□ 0.89
SNX11-212ENST00000583320 TMEM232C9JQI7 657 aa20.6■□□□□ 0.89
SNX11-212ENST00000583320 BMP3P12645 472 aa20.6■□□□□ 0.89
SNX11-212ENST00000583320 METAP2P50579 478 aaKnown RBP eCLIP20.6■□□□□ 0.89
SNX11-212ENST00000583320 SNAP25P60880 206 aa20.6■□□□□ 0.89
SNX11-212ENST00000583320 MUM1L1Q5H9M0 696 aa20.6■□□□□ 0.89
SNX11-212ENST00000583320 RCSD1Q6JBY9 416 aa20.6■□□□□ 0.89
SNX11-212ENST00000583320 CPLX2Q6PUV4 134 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms