RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 SELPP16109 830 aa17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CDC37Q16543 378 aaPredicted RBP17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 LRRC8DQ7L1W4 858 aa17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CHST3Q7LGC8 479 aa17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CCDC155Q8N6L0 562 aa17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 NBNO60934 754 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 RBL2Q08999 1139 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CNKSR3Q6P9H4 555 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 GDPD5Q8WTR4 605 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 KHSRPQ92945 711 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■□□□□ 9.1
CDK5RAP3-226ENST00000583182 LRFN3Q9BTN0 628 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 HDAC6Q9UBN7 1215 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ZBTB47Q9UFB7 747 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 GTF2IRD1Q9UHL9 959 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 SIP14410 1827 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 LAMA4Q16363 1823 aa17.31■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ABCB11O95342 1321 aa17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CXCL10P02778 98 aa17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CKBP12277 381 aa17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CASTP20810 708 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 STXBP2Q15833 593 aa17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 DGKHQ86XP1 1220 aa17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ADGRF4Q8IZF3 695 aa17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 NSUN6Q8TEA1 469 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ZBED2Q9BTP6 218 aa17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 DDX41Q9UJV9 622 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-226ENST00000583182 GJB5O95377 273 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 DGKDQ16760 1214 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 TRAF7Q6Q0C0 670 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 PNMA1Q8ND90 353 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ESR2Q92731 530 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 WNT8BQ93098 351 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 IWS1Q96ST2 819 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 RMDN3Q96TC7 470 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ALG1Q9BT22 464 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 MAF1Q9H063 256 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 RNF41Q9H4P4 317 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 SUGCTQ9HAC7 445 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 MTUS1Q9ULD2 1270 aa17.29■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ABHD14A-ACY1A0A1B0GW23 586 aa17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 PARNO95453 639 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 EIF2AK2P19525 551 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 PSEN2P49810 448 aa17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 TRIM71Q2Q1W2 868 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 QRICH1Q2TAL8 776 aa17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 C7orf31Q8N865 590 aa17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 EMID1Q96A84 441 aaPredicted RBP17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 RAD9AQ99638 391 aa17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 LMCD1Q9NZU5 365 aa17.28■□□□□ 0.36
CDK5RAP3-226ENST00000583182 LINC01553A4QN01 128 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 TRIM6-TRIM34B2RNG4 842 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 HAS3O00219 553 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 KDM4AO75164 1064 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 F2P00734 622 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ZNF286BP0CG31 522 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ERVK-21P61565 698 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ZNF200P98182 395 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 MBTPS1Q14703 1052 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 MFSD10Q14728 455 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ARHGEF16Q5VV41 709 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 MCF2L2Q86YR7 1114 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ANKS1AQ92625 1134 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CD320Q9NPF0 282 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 C11orf16Q9NQ32 467 aa17.27■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ZNF213O14771 459 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 EIF3JO75822 258 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 NR3C2P08235 984 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 PTK7Q13308 1070 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 HIC1Q14526 733 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 KIAA0753Q2KHM9 967 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 ASPRV1Q53RT3 343 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 TMEM31Q5JXX7 168 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 ZNF618Q5T7W0 954 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 FAM117BQ6P1L5 589 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 FBXO11Q86XK2 927 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 PPTC7Q8NI37 304 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 RILPL2Q969X0 211 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 TGS1Q96RS0 853 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 KATNAL1Q9BW62 490 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 KAT14Q9H8E8 782 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 JMJD4Q9H9V9 463 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 VAT1LQ9HCJ6 419 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 PXMP2Q9NR77 195 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 MRPL11Q9Y3B7 192 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 MRVI1Q9Y6F6 885 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 MICAL3Q7RTP6 2002 aa17.26■□□□□ 0.35
CDK5RAP3-226ENST00000583182 B4E1Z4 1266 aa17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 OPLAHO14841 1288 aa17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 SDSP20132 328 aa17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 LAMC2Q13753 1193 aa17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 IKBKEQ14164 716 aa17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 ENAHQ8N8S7 591 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 ZSCAN10Q96SZ4 725 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-226ENST00000583182 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms