RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 TTMPQ5BVD1 217 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 TTI2Q6NXR4 508 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 CABP7Q86V35 215 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 ARMC2Q8NEN0 867 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 CCDC51Q96ER9 411 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 ITIH6Q6UXX5 1313 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 NUTM2BA6NNL0 878 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 NUTM2EB1AL46 878 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 LSP1P33241 339 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 NAPAP54920 295 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 ZKSCAN8Q15776 578 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 CYB5D1Q6P9G0 228 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 ZNF473Q8WTR7 871 aaKnown RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 THOC1Q96FV9 657 aaKnown RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 CCDC42Q96M95 316 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 SH3GL2Q99962 352 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 CRNKL1Q9BZJ0 848 aaKnown RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 EXOC1Q9NV70 894 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 CPSF2Q9P2I0 782 aaKnown RBP11.62□□□□□ -0.55
TOP3A-214ENST00000582981 SALL4Q9UJQ4 1053 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 FAM184BQ9ULE4 1060 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 PCDHA6Q9UN73 950 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 PCDHA8Q9Y5H6 950 aa11.62□□□□□ -0.55
TOP3A-214ENST00000582981 POTEMA6NI47 508 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 LRRC10BA6NIK2 292 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 H7C1D1 291 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 OPLAHO14841 1288 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 BACH1O14867 736 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 TDRD12Q587J7 1177 aaKnown RBP11.61□□□□□ -0.55
TOP3A-214ENST00000582981 PARD3BQ8TEW8 1205 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 ZNF483Q8TF39 744 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-214ENST00000582981 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
TOP3A-214ENST00000582981 HAUS4Q9H6D7 363 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 ZNHIT6Q9NWK9 470 aaKnown RBP11.61□□□□□ -0.55
TOP3A-214ENST00000582981 BAIAP2L1Q9UHR4 511 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 FRMPD2Q68DX3 1309 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-214ENST00000582981 MYH3P11055 1940 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 KRT86O43790 486 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 AKR1B10O60218 316 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 MRPL12P52815 198 aaKnown RBP11.61□□□□□ -0.55
TOP3A-214ENST00000582981 INHBEP58166 350 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 RRAGAQ7L523 313 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 ZNF507Q8TCN5 953 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 IRAK4Q9NWZ3 460 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 PCDHA4Q9UN74 947 aa11.61□□□□□ -0.55
TOP3A-214ENST00000582981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.61□□□□□ -0.55
TOP3A-214ENST00000582981 SEMA3EO15041 775 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 DDAH1O94760 285 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 BMP15O95972 392 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 EIF4A3P38919 411 aaKnown RBP11.6□□□□□ -0.55
TOP3A-214ENST00000582981 GFPT1Q06210 699 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-214ENST00000582981 TRADDQ15628 312 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 WLSQ5T9L3 541 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
TOP3A-214ENST00000582981 CCT8L2Q96SF2 557 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 RMND1Q9NWS8 449 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 ANAPC4Q9UJX5 808 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 NID2Q14112 1375 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 RASSF9O75901 435 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 KIF5AQ12840 1032 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 TSEN2Q8NCE0 465 aaKnown RBP11.6□□□□□ -0.55
TOP3A-214ENST00000582981 KIAA0895Q8NCT3 520 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 NUDT12Q9BQG2 462 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 IFIH1Q9BYX4 1025 aaKnown RBP11.6□□□□□ -0.55
TOP3A-214ENST00000582981 ARHGAP20Q9P2F6 1191 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 TPX2Q9ULW0 747 aaKnown RBP11.6□□□□□ -0.55
TOP3A-214ENST00000582981 CAPN11Q9UMQ6 739 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 EIF4E1BA6NMX2 242 aaKnown RBP11.6□□□□□ -0.55
TOP3A-214ENST00000582981 CALM1P0DP23 149 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 CALM2P0DP24 149 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 CALM3P0DP25 149 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 RASSF7Q02833 373 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 CKAP4Q07065 602 aaKnown RBP11.6□□□□□ -0.55
TOP3A-214ENST00000582981 C11orf91Q3C1V1 193 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 ACCSLQ4AC99 568 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 ARMC3Q5W041 872 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 MICAL1Q8TDZ2 1067 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 IFT81Q8WYA0 676 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 COA7Q96BR5 231 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 DNAJC7Q99615 494 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 BRIP1Q9BX63 1249 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 ZHX3Q9H4I2 956 aa11.6□□□□□ -0.55
TOP3A-214ENST00000582981 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 PDS5AQ29RF7 1337 aaKnown RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 TMCO5BA8MYB1 307 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 PSMD14O00487 310 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 FTCDO95954 541 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 HIBADHP31937 336 aaKnown RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 CYLC1P35663 651 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 GUCY2FP51841 1108 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 SNX1Q13596 522 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 NELFCDQ8IXH7 590 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 P2RX5Q93086 422 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms