RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 LCHNA4D1U4 455 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 SELPP16109 830 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 CDC37Q16543 378 aaPredicted RBP15.87■□□□□ 0.13
SS18-222ENST00000582792 CNKSR3Q6P9H4 555 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 SEPT14Q6ZU15 432 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 DGKHQ86XP1 1220 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 SYTL5Q8TDW5 730 aaPredicted RBP15.87■□□□□ 0.13
SS18-222ENST00000582792 NSUN6Q8TEA1 469 aaKnown RBP15.87■□□□□ 0.13
SS18-222ENST00000582792 ESR2Q92731 530 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 FAM122AQ96E09 287 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 TAAR1Q96RJ0 339 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 IWS1Q96ST2 819 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 COL20A1Q9P218 1284 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 KIAA1217Q5T5P2 1943 aa15.87■□□□□ 0.13
SS18-222ENST00000582792 CXCL10P02778 98 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 CKBP12277 381 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 CASTP20810 708 aaKnown RBP15.86■□□□□ 0.13
SS18-222ENST00000582792 NT5C2P49902 561 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 STXBP2Q15833 593 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 DGKDQ16760 1214 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 CHST3Q7LGC8 479 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 TMCO2Q7Z6W1 182 aaPredicted RBP15.86■□□□□ 0.13
SS18-222ENST00000582792 PNMA1Q8ND90 353 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 RMDN3Q96TC7 470 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 ZKSCAN3Q9BRR0 538 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 RWDD1Q9H446 243 aaPredicted RBP15.86■□□□□ 0.13
SS18-222ENST00000582792 EPHX3Q9H6B9 360 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 LMCD1Q9NZU5 365 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 GTF2IRD1Q9UHL9 959 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 NEDD4P46934 1319 aa15.86■□□□□ 0.13
SS18-222ENST00000582792 NBNO60934 754 aa15.85■□□□□ 0.13
SS18-222ENST00000582792 DEFB103AP81534 67 aa15.85■□□□□ 0.13
SS18-222ENST00000582792 MCF2L2Q86YR7 1114 aa15.85■□□□□ 0.13
SS18-222ENST00000582792 ADGRF4Q8IZF3 695 aa15.85■□□□□ 0.13
SS18-222ENST00000582792 GDPD5Q8WTR4 605 aa15.85■□□□□ 0.13
SS18-222ENST00000582792 EMID1Q96A84 441 aaPredicted RBP15.85■□□□□ 0.13
SS18-222ENST00000582792 ZBED2Q9BTP6 218 aa15.85■□□□□ 0.13
SS18-222ENST00000582792 DDX41Q9UJV9 622 aaKnown RBP15.85■□□□□ 0.13
SS18-222ENST00000582792 ABHD14A-ACY1A0A1B0GW23 586 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 GJB5O95377 273 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 PSEN2P49810 448 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 MFAP1P55081 439 aaKnown RBP15.84■□□□□ 0.13
SS18-222ENST00000582792 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
SS18-222ENST00000582792 PTK7Q13308 1070 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 TCTN1Q2MV58 587 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 CCDC178Q5BJE1 867 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 ARHGEF16Q5VV41 709 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 IQCA1Q86XH1 822 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 C7orf31Q8N865 590 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 RAD9AQ99638 391 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 LRFN3Q9BTN0 628 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 KAT14Q9H8E8 782 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
SS18-222ENST00000582792 TRIM6-TRIM34B2RNG4 842 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 HAS3O00219 553 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 ZNF213O14771 459 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 EFCAB14O75071 495 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 EIF3JO75822 258 aaKnown RBP15.83■□□□□ 0.12
SS18-222ENST00000582792 F2P00734 622 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 NEFLP07196 543 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 EIF2AK2P19525 551 aaKnown RBP15.83■□□□□ 0.12
SS18-222ENST00000582792 ERVK-21P61565 698 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 LAMC2Q13753 1193 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 TRIM71Q2Q1W2 868 aaKnown RBP15.83■□□□□ 0.12
SS18-222ENST00000582792 QRICH1Q2TAL8 776 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 ASPRV1Q53RT3 343 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 FBXO11Q86XK2 927 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 PPTC7Q8NI37 304 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 ANKS1AQ92625 1134 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 RILPL2Q969X0 211 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 TGS1Q96RS0 853 aaKnown RBP15.83■□□□□ 0.12
SS18-222ENST00000582792 ALG1Q9BT22 464 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 SUGCTQ9HAC7 445 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 MRPL11Q9Y3B7 192 aaKnown RBP15.83■□□□□ 0.12
SS18-222ENST00000582792 ARIH1Q9Y4X5 557 aaPredicted RBP15.83■□□□□ 0.12
SS18-222ENST00000582792 BRWD1Q9NSI6 2320 aa15.83■□□□□ 0.12
SS18-222ENST00000582792 MYH6P13533 1939 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 LINC01553A4QN01 128 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 KDM4AO75164 1064 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 NR3C2P08235 984 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 IKBKEQ14164 716 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 MFSD10Q14728 455 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 KIAA0753Q2KHM9 967 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 TRAF7Q6Q0C0 670 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 PXMP2Q9NR77 195 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 MRVI1Q9Y6F6 885 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 SIP14410 1827 aa15.82■□□□□ 0.12
SS18-222ENST00000582792 ZNF286BP0CG31 522 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 HOXD8P13378 290 aaPredicted RBP15.81■□□□□ 0.12
SS18-222ENST00000582792 SDSP20132 328 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 TMEM31Q5JXX7 168 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 ZNF618Q5T7W0 954 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 SMC5Q8IY18 1101 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 DHX37Q8IY37 1157 aaKnown RBP15.81■□□□□ 0.12
SS18-222ENST00000582792 KHSRPQ92945 711 aaKnown RBP eCLIP15.81■□□□□ 0.123e-7■■■■□ 19.3
SS18-222ENST00000582792 WNT8BQ93098 351 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 ZSCAN10Q96SZ4 725 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms