RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 CNTNAP5Q8WYK1 1306 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 A6NJR5 290 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 MYL3P08590 195 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 CPT1AP50416 773 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 PURAQ00577 322 aaKnown RBP21.62■■□□□ 1.05
LIMS2-218ENST00000582671 ARHGAP1Q07960 439 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 FUT2Q10981 343 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 RTN1Q16799 776 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 USP17L6PQ6QN14 398 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 BLOC1S2Q6QNY1 142 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 USP26Q9BXU7 913 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 TBX21Q9UL17 535 aa21.62■■□□□ 1.05
LIMS2-218ENST00000582671 FRMPD4Q14CM0 1322 aa21.61■■□□□ 1.05
LIMS2-218ENST00000582671 MEIS2O14770 477 aa21.61■■□□□ 1.05
LIMS2-218ENST00000582671 EPB41L2O43491 1005 aaKnown RBP21.61■■□□□ 1.05
LIMS2-218ENST00000582671 CD4P01730 458 aa21.61■■□□□ 1.05
LIMS2-218ENST00000582671 RPS6KB1P23443 525 aa21.61■■□□□ 1.05
LIMS2-218ENST00000582671 CDC27P30260 824 aa21.61■■□□□ 1.05
LIMS2-218ENST00000582671 APOBRQ0VD83 1088 aa21.61■■□□□ 1.05
LIMS2-218ENST00000582671 POLR3EQ9NVU0 708 aa21.61■■□□□ 1.05
LIMS2-218ENST00000582671 RBM28Q9NW13 759 aaKnown RBP21.61■■□□□ 1.05
LIMS2-218ENST00000582671 GOLGA8AA7E2F4 631 aa21.6■■□□□ 1.05
LIMS2-218ENST00000582671 GOLGA8BA8MQT2 603 aa21.6■■□□□ 1.05
LIMS2-218ENST00000582671 PIK3CDO00329 1044 aa21.6■■□□□ 1.05
LIMS2-218ENST00000582671 GH1P01241 217 aa21.6■■□□□ 1.05
LIMS2-218ENST00000582671 RAG1P15918 1043 aa21.6■■□□□ 1.05
LIMS2-218ENST00000582671 AFG1LQ8WV93 481 aa21.6■■□□□ 1.05
LIMS2-218ENST00000582671 GPKOWQ92917 476 aaPredicted RBP eCLIP21.6■■□□□ 1.05
LIMS2-218ENST00000582671 BRF1Q92994 677 aa21.6■■□□□ 1.05
LIMS2-218ENST00000582671 LRCH3Q96II8 777 aa21.6■■□□□ 1.05
LIMS2-218ENST00000582671 MRPS9P82933 396 aaKnown RBP21.59■■□□□ 1.05
LIMS2-218ENST00000582671 FGD1P98174 961 aa21.59■■□□□ 1.05
LIMS2-218ENST00000582671 SMARCC2Q8TAQ2 1214 aa21.59■■□□□ 1.05
LIMS2-218ENST00000582671 PPP1R13LQ8WUF5 828 aa21.59■■□□□ 1.05
LIMS2-218ENST00000582671 MTG1Q9BT17 334 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-218ENST00000582671 MRVI1Q9Y6F6 885 aa21.59■■□□□ 1.05
LIMS2-218ENST00000582671 MMP3P08254 477 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 CASTP20810 708 aaKnown RBP21.58■■□□□ 1.05
LIMS2-218ENST00000582671 CCND2P30279 289 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 EPHB4P54760 987 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 SP2Q02086 613 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 WWC2Q6AWC2 1192 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 TYW1BQ6NUM6 668 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 FBXL16Q8N461 479 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 AGXT2Q9BYV1 514 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 TRPV6Q9H1D0 765 aa21.58■■□□□ 1.05
LIMS2-218ENST00000582671 NAP1L2Q9ULW6 460 aaPredicted RBP21.58■■□□□ 1.05
LIMS2-218ENST00000582671 TLR3O15455 904 aaKnown RBP21.57■■□□□ 1.04
LIMS2-218ENST00000582671 B4GALT4O60513 344 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 TIMP1P01033 207 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 PSMA5P28066 241 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 ADD1P35611 737 aaKnown RBP21.57■■□□□ 1.04
LIMS2-218ENST00000582671 RCAN1P53805 252 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 SHHQ15465 462 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 LRIT3Q3SXY7 679 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 BRDTQ58F21 947 aaPredicted RBP21.57■■□□□ 1.04
LIMS2-218ENST00000582671 C9orf50Q5SZB4 431 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 HEATR3Q7Z4Q2 680 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 CUL5Q93034 780 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 PSTPIP2Q9H939 334 aa21.57■■□□□ 1.04
LIMS2-218ENST00000582671 V9GY48 417 aaPredicted RBP21.57■■□□□ 1.04
LIMS2-218ENST00000582671 TRIP12Q14669 1992 aaPredicted RBP21.57■■□□□ 1.04
LIMS2-218ENST00000582671 KPNA6O60684 536 aa21.56■■□□□ 1.04
LIMS2-218ENST00000582671 METAP2P50579 478 aaKnown RBP eCLIP21.56■■□□□ 1.04
LIMS2-218ENST00000582671 UBE2SQ16763 222 aa21.56■■□□□ 1.04
LIMS2-218ENST00000582671 PPP1R12CQ9BZL4 782 aa21.56■■□□□ 1.04
LIMS2-218ENST00000582671 ZSWIM6Q9HCJ5 1215 aa21.56■■□□□ 1.04
LIMS2-218ENST00000582671 RTEL1Q9NZ71 1219 aa21.56■■□□□ 1.04
LIMS2-218ENST00000582671 SCN5AQ14524 2016 aa21.56■■□□□ 1.04
LIMS2-218ENST00000582671 SORBS3O60504 671 aa21.55■■□□□ 1.04
LIMS2-218ENST00000582671 UBA1P22314 1058 aaKnown RBP21.55■■□□□ 1.04
LIMS2-218ENST00000582671 NBPF20Q3BBV1 942 aa21.55■■□□□ 1.04
LIMS2-218ENST00000582671 MYSM1Q5VVJ2 828 aa21.55■■□□□ 1.04
LIMS2-218ENST00000582671 RUFY3Q7L099 469 aa21.55■■□□□ 1.04
LIMS2-218ENST00000582671 DHX37Q8IY37 1157 aaKnown RBP21.55■■□□□ 1.04
LIMS2-218ENST00000582671 EMID1Q96A84 441 aaPredicted RBP21.55■■□□□ 1.04
LIMS2-218ENST00000582671 SEZ6LQ9BYH1 1024 aa21.55■■□□□ 1.04
LIMS2-218ENST00000582671 ALDH8A1Q9H2A2 487 aaPredicted RBP21.55■■□□□ 1.04
LIMS2-218ENST00000582671 BCAS3Q9H6U6 928 aa21.55■■□□□ 1.04
LIMS2-218ENST00000582671 TRMT13Q9NUP7 481 aaKnown RBP21.55■■□□□ 1.04
LIMS2-218ENST00000582671 NID2Q14112 1375 aa21.55■■□□□ 1.04
LIMS2-218ENST00000582671 UMODL1Q5DID0 1318 aa21.55■■□□□ 1.04
LIMS2-218ENST00000582671 FPGSQ05932 587 aa21.54■■□□□ 1.04
LIMS2-218ENST00000582671 SEMA3FQ13275 785 aa21.54■■□□□ 1.04
LIMS2-218ENST00000582671 LAMC2Q13753 1193 aa21.54■■□□□ 1.04
LIMS2-218ENST00000582671 TOB2Q14106 344 aaPredicted RBP21.54■■□□□ 1.04
LIMS2-218ENST00000582671 CELF3Q5SZQ8 465 aaKnown RBP21.54■■□□□ 1.04
LIMS2-218ENST00000582671 PCNX4Q63HM2 1172 aa21.54■■□□□ 1.04
LIMS2-218ENST00000582671 MFSD5Q6N075 450 aa21.54■■□□□ 1.04
LIMS2-218ENST00000582671 KCNV1Q6PIU1 500 aa21.54■■□□□ 1.04
LIMS2-218ENST00000582671 KAT2BQ92831 832 aa21.54■■□□□ 1.04
LIMS2-218ENST00000582671 INPP4AQ96PE3 977 aaPredicted RBP21.54■■□□□ 1.04
LIMS2-218ENST00000582671 STXBP3O00186 592 aa21.53■■□□□ 1.04
LIMS2-218ENST00000582671 GGPS1O95749 300 aa21.53■■□□□ 1.04
LIMS2-218ENST00000582671 ICAM3P32942 547 aa21.53■■□□□ 1.04
LIMS2-218ENST00000582671 CYP2C18P33260 490 aa21.53■■□□□ 1.04
LIMS2-218ENST00000582671 EVCP57679 992 aa21.53■■□□□ 1.04
LIMS2-218ENST00000582671 TANC1Q9C0D5 1861 aa21.53■■□□□ 1.04
LIMS2-218ENST00000582671 SPATA31C2B4DYI2 1134 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 STAM2O75886 525 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms