RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 LARP4BQ92615 738 aaKnown RBP25.37■■□□□ 1.65
CCDC47-204ENST00000582252 DHTKD1Q96HY7 919 aaPredicted RBP25.37■■□□□ 1.65
CCDC47-204ENST00000582252 NT5C3AQ9H0P0 336 aa25.37■■□□□ 1.65
CCDC47-204ENST00000582252 LIMA1Q9UHB6 759 aaKnown RBP25.37■■□□□ 1.65
CCDC47-204ENST00000582252 TBX2Q13207 712 aaPredicted RBP25.37■■□□□ 1.65
CCDC47-204ENST00000582252 SPICE1Q8N0Z3 855 aa25.37■■□□□ 1.65
CCDC47-204ENST00000582252 WRNIP1Q96S55 665 aa25.37■■□□□ 1.65
CCDC47-204ENST00000582252 STK24Q9Y6E0 443 aa25.37■■□□□ 1.65
CCDC47-204ENST00000582252 BICDL2A1A5D9 508 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 POTEMA6NI47 508 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 TBX3O15119 743 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 ARHGAP4P98171 946 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 PDE4DQ08499 809 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 TMEM119Q4V9L6 283 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 COBLL1Q53SF7 1204 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 ACER1Q8TDN7 264 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 HAS1Q92839 578 aa25.36■■□□□ 1.65
CCDC47-204ENST00000582252 ADD3Q9UEY8 706 aaKnown RBP25.36■■□□□ 1.65
CCDC47-204ENST00000582252 PVALEFA0A1B0GWK0 134 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 KIF2AO00139 706 aaPredicted RBP25.35■■□□□ 1.65
CCDC47-204ENST00000582252 PIK3CDO00329 1044 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 INPP5BP32019 993 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 FAM83BQ5T0W9 1011 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 LRRC15Q8TF66 581 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 RAD54LQ92698 747 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 KLRG1Q96E93 195 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 PNMA5Q96PV4 448 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 KCNMB3Q9NPA1 279 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 OTOFQ9HC10 1997 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 PAPPA2Q9BXP8 1791 aa25.35■■□□□ 1.65
CCDC47-204ENST00000582252 NF2P35240 595 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 SREBF1P36956 1147 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 APTXQ7Z2E3 356 aaKnown RBP25.34■■□□□ 1.65
CCDC47-204ENST00000582252 SCYL3Q8IZE3 742 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 CCAR2Q8N163 923 aaKnown RBP25.34■■□□□ 1.65
CCDC47-204ENST00000582252 BLOC1S4Q9NUP1 217 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 FEM1BQ9UK73 627 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 PPP1R12BO60237 982 aaPredicted RBP25.34■■□□□ 1.65
CCDC47-204ENST00000582252 TNNT1P13805 278 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 SNAP25P60880 206 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 Q4G0T1 1027 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 HYIQ5T013 277 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 UNC13DQ70J99 1090 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 CDCA5Q96FF9 252 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 C16orf45Q96MC5 204 aaPredicted RBP25.34■■□□□ 1.65
CCDC47-204ENST00000582252 RANBP17Q9H2T7 1088 aaKnown RBP25.34■■□□□ 1.65
CCDC47-204ENST00000582252 THAP9Q9H5L6 903 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 EHMT1Q9H9B1 1298 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 CLEC11AQ9Y240 323 aa25.34■■□□□ 1.65
CCDC47-204ENST00000582252 PHIPQ8WWQ0 1821 aa25.33■■□□□ 1.65
CCDC47-204ENST00000582252 LRRC10BA6NIK2 292 aa25.33■■□□□ 1.65
CCDC47-204ENST00000582252 FCHSD1Q86WN1 690 aa25.33■■□□□ 1.65
CCDC47-204ENST00000582252 CRYGNQ8WXF5 182 aa25.33■■□□□ 1.65
CCDC47-204ENST00000582252 TMX1Q9H3N1 280 aa25.33■■□□□ 1.65
CCDC47-204ENST00000582252 RRAGCQ9HB90 399 aa25.33■■□□□ 1.65
CCDC47-204ENST00000582252 KCNJ18B7U540 433 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 TPM1P09493 284 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 KCNJ12Q14500 433 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 PTPN14Q15678 1187 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 TCP11X2Q5H9J9 407 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 HAUS3Q68CZ6 603 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 PPFIBP1Q86W92 1011 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 TRIM47Q96LD4 638 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 PICK1Q9NRD5 415 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 MAGEC2Q9UBF1 373 aaPredicted RBP25.32■■□□□ 1.64
CCDC47-204ENST00000582252 MRPL11Q9Y3B7 192 aaKnown RBP25.32■■□□□ 1.64
CCDC47-204ENST00000582252 ITIH6Q6UXX5 1313 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 UQCRHLA0A096LP55 91 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 TUBB4AP04350 444 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 UQCRHP07919 91 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 EEF1GP26641 437 aaKnown RBP25.32■■□□□ 1.64
CCDC47-204ENST00000582252 CCT6AP40227 531 aaKnown RBP25.32■■□□□ 1.64
CCDC47-204ENST00000582252 MCM6Q14566 821 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 NOL9Q5SY16 702 aaKnown RBP25.32■■□□□ 1.64
CCDC47-204ENST00000582252 MYRIPQ8NFW9 859 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.32■■□□□ 1.64
CCDC47-204ENST00000582252 ERMNQ8TAM6 284 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 FAM20AQ96MK3 541 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 GLIS2Q9BZE0 524 aaPredicted RBP25.32■■□□□ 1.64
CCDC47-204ENST00000582252 MAPK8IP1Q9UQF2 711 aa25.32■■□□□ 1.64
CCDC47-204ENST00000582252 ARHGAP6O43182 974 aa25.31■■□□□ 1.64
CCDC47-204ENST00000582252 USP2O75604 605 aaPredicted RBP25.31■■□□□ 1.64
CCDC47-204ENST00000582252 CCNE1P24864 410 aa25.31■■□□□ 1.64
CCDC47-204ENST00000582252 CIITAP33076 1130 aa25.31■■□□□ 1.64
CCDC47-204ENST00000582252 KRT31Q15323 416 aa25.31■■□□□ 1.64
CCDC47-204ENST00000582252 FAM114A1Q8IWE2 563 aa25.31■■□□□ 1.64
CCDC47-204ENST00000582252 BMP2KQ9NSY1 1161 aaPredicted RBP25.31■■□□□ 1.64
CCDC47-204ENST00000582252 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.31■■□□□ 1.64
CCDC47-204ENST00000582252 PAXBP1Q9Y5B6 917 aa25.31■■□□□ 1.64
CCDC47-204ENST00000582252 N4BP3O15049 544 aa25.3■■□□□ 1.64
CCDC47-204ENST00000582252 CYP3A4P08684 503 aa25.3■■□□□ 1.64
CCDC47-204ENST00000582252 COPB1P53618 953 aaKnown RBP25.3■■□□□ 1.64
CCDC47-204ENST00000582252 PSMD2Q13200 908 aa25.3■■□□□ 1.64
CCDC47-204ENST00000582252 KIAA1755Q5JYT7 1200 aa25.3■■□□□ 1.64
CCDC47-204ENST00000582252 P2RX5Q93086 422 aa25.3■■□□□ 1.64
CCDC47-204ENST00000582252 ZKSCAN4Q969J2 545 aaPredicted RBP25.3■■□□□ 1.64
CCDC47-204ENST00000582252 KIFC2Q96AC6 838 aa25.3■■□□□ 1.64
CCDC47-204ENST00000582252 FEZ1Q99689 392 aa25.3■■□□□ 1.64
CCDC47-204ENST00000582252 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.3■■□□□ 1.649e-9■□□□□ 10.6
CCDC47-204ENST00000582252 ABCB11O95342 1321 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms