RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 ZMYND12Q9H0C1 365 aa11.95□□□□□ -0.5
TOP3A-212ENST00000582122 UPF3AQ9H1J1 476 aaKnown RBP11.95□□□□□ -0.5
TOP3A-212ENST00000582122 C11orf49Q9H6J7 331 aa11.95□□□□□ -0.5
TOP3A-212ENST00000582122 NCOA5Q9HCD5 579 aaKnown RBP11.95□□□□□ -0.5
TOP3A-212ENST00000582122 COL20A1Q9P218 1284 aa11.95□□□□□ -0.5
TOP3A-212ENST00000582122 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 MAFGO15525 162 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 KPNA6O60684 536 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 CABYRO75952 493 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 CPT1AP50416 773 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 SCRN1Q12765 414 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 PGM5Q15124 567 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 LRRC41Q15345 812 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 NLRX1Q86UT6 975 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 FBXO16Q8IX29 292 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-212ENST00000582122 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-212ENST00000582122 SLC17A8Q8NDX2 589 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.5
TOP3A-212ENST00000582122 PHKBQ93100 1093 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 GTF3C6Q969F1 213 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 LLPHQ9BRT6 129 aaKnown RBP11.94□□□□□ -0.5
TOP3A-212ENST00000582122 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 GNEQ9Y223 722 aaKnown RBP11.94□□□□□ -0.5
TOP3A-212ENST00000582122 KIF3AQ9Y496 699 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 LAMA3Q16787 3333 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 MCM3APO60318 1980 aa11.94□□□□□ -0.5
TOP3A-212ENST00000582122 SYNRGQ9UMZ2 1314 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 DLL1O00548 723 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 C6orf222P0C671 652 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-212ENST00000582122 TXNP10599 105 aaKnown RBP11.93□□□□□ -0.5
TOP3A-212ENST00000582122 MYCLP12524 364 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-212ENST00000582122 ADCYAP1R1P41586 468 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 PKN1Q16512 942 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 USP17L6PQ6QN14 398 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 EEPD1Q7L9B9 569 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 TLK2Q86UE8 772 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 REXO1Q8N1G1 1221 aaKnown RBP11.93□□□□□ -0.5
TOP3A-212ENST00000582122 KLHDC9Q8NEP7 349 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 PAWRQ96IZ0 340 aaKnown RBP11.93□□□□□ -0.5
TOP3A-212ENST00000582122 PURBQ96QR8 312 aaKnown RBP11.93□□□□□ -0.5
TOP3A-212ENST00000582122 KIF2CQ99661 725 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 PCDHA6Q9UN73 950 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 PHF24Q9UPV7 400 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 PCDHA8Q9Y5H6 950 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 MRVI1Q9Y6F6 885 aa11.93□□□□□ -0.5
TOP3A-212ENST00000582122 FIBPO43427 364 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 ADAMTS4O75173 837 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 PGK1P00558 417 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 GH1P01241 217 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 COL6A1P12109 1028 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 SMPD1P17405 629 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 ICAM3P32942 547 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 NLRP5P59047 1200 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 HMGN5P82970 282 aaKnown RBP11.92□□□□□ -0.5
TOP3A-212ENST00000582122 LAMC2Q13753 1193 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 FSCN1Q16658 493 aaKnown RBP11.92□□□□□ -0.5
TOP3A-212ENST00000582122 ME3Q16798 604 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 GNASQ5JWF2 1037 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 CCDC62Q6P9F0 684 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 SEPT14Q6ZU15 432 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 EMID1Q96A84 441 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-212ENST00000582122 GPRASP2Q96D09 838 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 INPP4AQ96PE3 977 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-212ENST00000582122 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
TOP3A-212ENST00000582122 BRMS1Q9HCU9 246 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-212ENST00000582122 LCTP09848 1927 aa11.92□□□□□ -0.5
TOP3A-212ENST00000582122 ELP1O95163 1332 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 DYNC1LI2O43237 492 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-212ENST00000582122 EVI5O60447 810 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-212ENST00000582122 CLK2P49760 499 aaKnown RBP11.91□□□□□ -0.5
TOP3A-212ENST00000582122 TRIM29Q14134 588 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 NEDD9Q14511 834 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 GJC2Q5T442 439 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-212ENST00000582122 C1orf53Q5VUE5 145 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 NIPA1Q7RTP0 329 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 DAGLBQ8NCG7 672 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 OR6J1Q8NGC5 347 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 SENP7Q9BQF6 1050 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 PDGFCQ9NRA1 345 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 PCDHA4Q9UN74 947 aa11.91□□□□□ -0.5
TOP3A-212ENST00000582122 MROH7Q68CQ1 1323 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-212ENST00000582122 A6NJR5 290 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 SREBF1P36956 1147 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 MNX1P50219 401 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-212ENST00000582122 ACLYP53396 1101 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 KCNA10Q16322 511 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 UBE2SQ16763 222 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 DHX37Q8IY37 1157 aaKnown RBP11.9□□□□□ -0.5
TOP3A-212ENST00000582122 ANO3Q9BYT9 981 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 SENP6Q9GZR1 1112 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-212ENST00000582122 VPS54Q9P1Q0 977 aa11.9□□□□□ -0.5
TOP3A-212ENST00000582122 DDX41Q9UJV9 622 aaKnown RBP11.9□□□□□ -0.5
TOP3A-212ENST00000582122 LRRC37A2A6NM11 1700 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms