RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 UPP2O95045 317 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 MMP1P03956 469 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 IGF2RP11717 2491 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 AOC1P19801 751 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 BMPR1AP36894 532 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 MBTPS1Q14703 1052 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 DUSP28Q4G0W2 176 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 ADGRD2Q7Z7M1 963 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 TOP1MTQ969P6 601 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 PPP2R3CQ969Q6 453 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 SLF1Q9BQI6 1058 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 RTKNQ9BST9 563 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 FBXO40Q9UH90 709 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 CDV3Q9UKY7 258 aaKnown RBP11.39□□□□□ -0.59
CTC1-208ENST00000581671 NOP58Q9Y2X3 529 aaKnown RBP11.39□□□□□ -0.59
CTC1-208ENST00000581671 MYH8P13535 1937 aa11.39□□□□□ -0.59
CTC1-208ENST00000581671 LINC00271P0C7V0 271 aa11.38□□□□□ -0.59
CTC1-208ENST00000581671 G3BP1Q13283 466 aaKnown RBP eCLIP11.38□□□□□ -0.59
CTC1-208ENST00000581671 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
CTC1-208ENST00000581671 GDF6Q6KF10 455 aaPredicted RBP11.38□□□□□ -0.59
CTC1-208ENST00000581671 TRAF7Q6Q0C0 670 aa11.38□□□□□ -0.59
CTC1-208ENST00000581671 MIGA1Q8NAN2 632 aa11.38□□□□□ -0.59
CTC1-208ENST00000581671 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
CTC1-208ENST00000581671 DBF4BQ8NFT6 615 aa11.38□□□□□ -0.59
CTC1-208ENST00000581671 ZNF512BQ96KM6 892 aaPredicted RBP11.38□□□□□ -0.59
CTC1-208ENST00000581671 RAVER2Q9HCJ3 691 aaKnown RBP11.38□□□□□ -0.59
CTC1-208ENST00000581671 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
CTC1-208ENST00000581671 IGSF5Q9NSI5 407 aa11.38□□□□□ -0.59
CTC1-208ENST00000581671 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 USP17L12C9JPN9 530 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 USP17L21D6R901 530 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 RAD21O60216 631 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 CYP2E1P05181 493 aaPredicted RBP11.37□□□□□ -0.59
CTC1-208ENST00000581671 POLR3DP05423 398 aaPredicted RBP11.37□□□□□ -0.59
CTC1-208ENST00000581671 NRIP1P48552 1158 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 CHMP4BP1P59074 171 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 TNNI3KQ59H18 835 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 FIBCD1Q8N539 461 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 SUMF1Q8NBK3 374 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 FPGT-TNNI3KV9GXZ4 949 aa11.37□□□□□ -0.59
CTC1-208ENST00000581671 SMG1Q96Q15 3661 aaKnown RBP11.37□□□□□ -0.59
CTC1-208ENST00000581671 PRR5-ARHGAP8B1AHC4 643 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 UQCRFS1P1P0C7P4 283 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 AKR1B1P15121 316 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 NPR3P17342 541 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 CYP7A1P22680 504 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 ARHGAP8P85298 464 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 PPM1JQ5JR12 505 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 RBM23Q86U06 439 aaKnown RBP11.36□□□□□ -0.59
CTC1-208ENST00000581671 OR6J1Q8NGC5 347 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 DBNDD2Q9BQY9 259 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 HOMER2Q9NSB8 354 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 MYH7P12883 1935 aa11.36□□□□□ -0.59
CTC1-208ENST00000581671 IGSF3O75054 1194 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 ZBED4O75132 1171 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 EEF2P13639 858 aaKnown RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 DNAJB1P25685 340 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 RBM10P98175 930 aaKnown RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 HNRNPUQ00839 825 aaKnown RBP eCLIP11.35□□□□□ -0.59
CTC1-208ENST00000581671 BRDTQ58F21 947 aaPredicted RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 ZNF618Q5T7W0 954 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 ZC3H14Q6PJT7 736 aaKnown RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 PRPF38AQ8NAV1 312 aaKnown RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 RIN2Q8WYP3 895 aaPredicted RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 EAF2Q96CJ1 260 aaPredicted RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 NUP88Q99567 741 aaPredicted RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 RTP3Q9BQQ7 232 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 IFIH1Q9BYX4 1025 aaKnown RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 WDR11Q9BZH6 1224 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 A1CFQ9NQ94 594 aaKnown RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 DBNLQ9UJU6 430 aaKnown RBP11.35□□□□□ -0.59
CTC1-208ENST00000581671 ANGPTL2Q9UKU9 493 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 PLAGL2Q9UPG8 496 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 COG6Q9Y2V7 657 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 RWDD3Q9Y3V2 267 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 BPTFQ12830 3046 aa11.35□□□□□ -0.59
CTC1-208ENST00000581671 A6NJR5 290 aa11.34□□□□□ -0.59
CTC1-208ENST00000581671 KPNA6O60684 536 aa11.34□□□□□ -0.59
CTC1-208ENST00000581671 SURF6O75683 361 aaKnown RBP11.34□□□□□ -0.59
CTC1-208ENST00000581671 LMNB2Q03252 620 aa11.34□□□□□ -0.59
CTC1-208ENST00000581671 SESTD1Q86VW0 696 aa11.34□□□□□ -0.59
CTC1-208ENST00000581671 CERS3Q8IU89 383 aa11.34□□□□□ -0.59
CTC1-208ENST00000581671 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
CTC1-208ENST00000581671 IL17RAQ96F46 866 aa11.34□□□□□ -0.59
CTC1-208ENST00000581671 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
CTC1-208ENST00000581671 CTDP1Q9Y5B0 961 aaPredicted RBP11.34□□□□□ -0.59
CTC1-208ENST00000581671 BAZ2AQ9UIF9 1905 aaKnown RBP11.33□□□□□ -0.6
CTC1-208ENST00000581671 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.33□□□□□ -0.6
CTC1-208ENST00000581671 ASGR2P07307 311 aa11.33□□□□□ -0.6
CTC1-208ENST00000581671 ZAP70P43403 619 aa11.33□□□□□ -0.6
CTC1-208ENST00000581671 ZNF200P98182 395 aaPredicted RBP11.33□□□□□ -0.6
CTC1-208ENST00000581671 TRIM71Q2Q1W2 868 aaKnown RBP11.33□□□□□ -0.6
CTC1-208ENST00000581671 PLEKHG4Q58EX7 1191 aa11.33□□□□□ -0.6
CTC1-208ENST00000581671 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.6
CTC1-208ENST00000581671 CEP85Q6P2H3 762 aa11.33□□□□□ -0.6
CTC1-208ENST00000581671 VN1R2Q8NFZ6 395 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms