RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FSHBP01225 129 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 THBDP07204 575 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 CASP7P55210 303 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 SCRN1Q12765 414 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 BORAQ6PGQ7 559 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 CRIP3Q6Q6R5 217 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 CD300LDQ6UXZ3 194 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 SPRED1Q7Z699 444 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 RIOX2Q8IUF8 465 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 DNERQ8NFT8 737 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 NPLOC4Q8TAT6 608 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 SHDQ96IW2 340 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 EFR3BQ9Y2G0 817 aa6.18□□□□□ -1.42
SMCHD1-206ENST00000581631 ANKRD34BA5PLL1 514 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 ARNTLO00327 626 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 DDX3XO00571 662 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 SLPIP03973 132 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 C6P13671 934 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 TACR2P21452 398 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 ACVRL1P37023 503 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 ICAM4Q14773 271 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 NLRP10Q86W26 655 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 FRS2Q8WU20 508 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 CRBNQ96SW2 442 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 AP5M1Q9H0R1 490 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 BCL11AQ9H165 835 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 AKT3Q9Y243 479 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 X6R8D5 127 aa6.17□□□□□ -1.42
SMCHD1-206ENST00000581631 PKN3Q6P5Z2 889 aa6.16□□□□□ -1.42
SMCHD1-206ENST00000581631 METTL16Q86W50 562 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-206ENST00000581631 TRIM59Q8IWR1 403 aa6.16□□□□□ -1.42
SMCHD1-206ENST00000581631 LCORQ96JN0 433 aaPredicted RBP6.16□□□□□ -1.42
SMCHD1-206ENST00000581631 MRGPRX3Q96LB0 322 aa6.16□□□□□ -1.42
SMCHD1-206ENST00000581631 SPATA32Q96LK8 384 aa6.16□□□□□ -1.42
SMCHD1-206ENST00000581631 YTHDC1Q96MU7 727 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-206ENST00000581631 SUGT1Q9Y2Z0 365 aa6.16□□□□□ -1.42
SMCHD1-206ENST00000581631 C22orf46C9J442 243 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 GPR42O15529 346 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 LAMTOR5O43504 91 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 KCNH1O95259 989 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 RECKO95980 971 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 FPR2P25090 351 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 STAT5AP42229 794 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 KIAA1211LQ6NV74 962 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 GLB1LQ6UWU2 654 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 FAM124AQ86V42 546 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 ZC3H18Q86VM9 953 aaKnown RBP6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 CCDC103Q8IW40 242 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 BVESQ8NE79 360 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 CHST13Q8NET6 341 aa6.15□□□□□ -1.42
SMCHD1-206ENST00000581631 R3HDM1Q15032 1099 aaKnown RBP6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 SURF1Q15526 300 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 MROH9Q5TGP6 573 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 GTF2IRD2BQ6EKJ0 949 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 GTF2IRD2Q86UP8 949 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 ZNF654Q8IZM8 581 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 FAM169BQ8N8A8 192 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 SH3RF3Q8TEJ3 882 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 NKX2-4Q9H2Z4 354 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 CYP26B1Q9NR63 512 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 WASF3Q9UPY6 502 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 ZNF652Q9Y2D9 606 aa6.14□□□□□ -1.43
SMCHD1-206ENST00000581631 GJA8P48165 433 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 ZNF143P52747 638 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 EPHB4P54760 987 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 TESK1Q15569 626 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 VHLLQ6RSH7 139 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 MILR1Q7Z6M3 343 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 ZCCHC14Q8WYQ9 949 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 GPRASP2Q96D09 838 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 ZNF747Q9BV97 191 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 NGRNQ9NPE2 291 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 TMEFF2Q9UIK5 374 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 FBXL7Q9UJT9 491 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 ZNF536O15090 1300 aa6.13□□□□□ -1.43
SMCHD1-206ENST00000581631 CYR61O00622 381 aa6.12□□□□□ -1.43
SMCHD1-206ENST00000581631 E4F1Q66K89 784 aaPredicted RBP6.12□□□□□ -1.43
SMCHD1-206ENST00000581631 POMZP3Q6PJE2 187 aa6.12□□□□□ -1.43
SMCHD1-206ENST00000581631 PLEKHH3Q7Z736 793 aa6.12□□□□□ -1.43
SMCHD1-206ENST00000581631 CRACR2BQ8N4Y2 399 aaPredicted RBP6.12□□□□□ -1.43
SMCHD1-206ENST00000581631 WWC2-AS2Q96NR7 200 aa6.12□□□□□ -1.43
SMCHD1-206ENST00000581631 LGR4Q9BXB1 951 aa6.12□□□□□ -1.43
SMCHD1-206ENST00000581631 KLC2Q9H0B6 622 aa6.12□□□□□ -1.43
SMCHD1-206ENST00000581631 MLLT6P55198 1093 aaPredicted RBP6.11□□□□□ -1.43
SMCHD1-206ENST00000581631 RPL11P62913 178 aaKnown RBP6.11□□□□□ -1.43
SMCHD1-206ENST00000581631 EMC4Q5J8M3 183 aa6.11□□□□□ -1.43
SMCHD1-206ENST00000581631 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
SMCHD1-206ENST00000581631 IGDCC4Q8TDY8 1250 aa6.11□□□□□ -1.43
SMCHD1-206ENST00000581631 KISS1RQ969F8 398 aaPredicted RBP6.11□□□□□ -1.43
SMCHD1-206ENST00000581631 BTG4Q9NY30 223 aa6.11□□□□□ -1.43
SMCHD1-206ENST00000581631 TIMM13Q9Y5L4 95 aaPredicted RBP6.11□□□□□ -1.43
SMCHD1-206ENST00000581631 OVOL3O00110 214 aa6.1□□□□□ -1.43
SMCHD1-206ENST00000581631 TADA3O75528 432 aa6.1□□□□□ -1.43
SMCHD1-206ENST00000581631 SCG5P05408 212 aa6.1□□□□□ -1.43
SMCHD1-206ENST00000581631 COL6A1P12109 1028 aa6.1□□□□□ -1.43
SMCHD1-206ENST00000581631 VAMP1P23763 118 aa6.1□□□□□ -1.43
SMCHD1-206ENST00000581631 IL13P35225 146 aa6.1□□□□□ -1.43
SMCHD1-206ENST00000581631 BCL6P41182 706 aa6.1□□□□□ -1.43
SMCHD1-206ENST00000581631 NKX3-2P78367 333 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms