RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 MMS19Q96T76 1030 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 FTCDO95954 541 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 PNMA6AP0CW24 399 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 HNRNPH2P55795 449 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 ZMYM1Q5SVZ6 1142 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 PPP1R2P3Q6NXS1 205 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 ZNF653Q96CK0 615 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 ANTXR1Q9H6X2 564 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 OATP04181 439 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 PDE1BQ01064 536 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 LRRC23Q53EV4 343 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 FBXO11Q86XK2 927 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 SMYD4Q8IYR2 804 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 NT5C1BQ96P26 610 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 ECM2O94769 699 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 CPP00450 1065 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 C6orf118Q5T5N4 469 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 ZMYND12Q9H0C1 365 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 CCNL1Q9UK58 526 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 GJA3Q9Y6H8 435 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 TESPA1A2RU30 521 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 MYO1FO00160 1098 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 TTI1O43156 1089 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 CD2BP2O95400 341 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 GOLGA8HP0CJ92 632 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 CXCR5P32302 372 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 POLE2P56282 527 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 PLA2G4DQ86XP0 818 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 LINC00301Q8NCQ3 95 aa15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 ABTB1Q969K4 478 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 RNF26Q9BY78 433 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-217ENST00000581241 SRGAP2BP0DMP2 458 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 KIF23Q02241 960 aaPredicted RBP15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 ADCY2Q08462 1091 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 UBE3CQ15386 1083 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 MCF2L2Q86YR7 1114 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 KIAA1024Q9UPX6 916 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 NDUFA10O95299 355 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 PLCB4Q15147 1175 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 FAM81BQ96LP2 452 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 EFHD1Q9BUP0 239 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 PACSIN2Q9UNF0 486 aaPredicted RBP15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 NR2F2P24468 414 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 IL1RL1Q01638 556 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 FAM133AQ8N9E0 248 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 RCOR1Q9UKL0 485 aa15.77■□□□□ 0.12
CSNK1D-217ENST00000581241 POLD1P28340 1107 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 CASP2P42575 452 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 DR1Q01658 176 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 ADCY1Q08828 1119 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 LRRC47Q8N1G4 583 aaKnown RBP15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 NEK9Q8TD19 979 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 CCDC68Q9H2F9 335 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 BTG4Q9NY30 223 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 HESX1Q9UBX0 185 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 MMP1P03956 469 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 KRT1P04264 644 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 TMED1Q13445 227 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 ST13P4Q8IZP2 240 aaPredicted RBP15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 ANKFY1Q9P2R3 1169 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 NUB1Q9Y5A7 615 aa15.77■□□□□ 0.11
CSNK1D-217ENST00000581241 CIAO1O76071 339 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 PLS3P13797 630 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 EIF4A3P38919 411 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 TERF2Q15554 542 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 RSBN1LQ6PCB5 846 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 RASGRF2O14827 1237 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 MAPK13O15264 365 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 MT-ND3P03897 115 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 ZBED6P86452 979 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 TRMT2AQ8IZ69 625 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 EIF2AQ9BY44 585 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 TMEM191BP0C7N4 346 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 SLC7A5Q01650 507 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 RESTQ13127 1097 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 GRAMD1CQ8IYS0 662 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 METTL13Q8N6R0 699 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 GJA10Q969M2 543 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 IVNS1ABPQ9Y6Y0 642 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 PPP2R5AQ15172 486 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 ANLNQ9NQW6 1124 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 SAMSN1Q9NSI8 373 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 MLH3Q9UHC1 1453 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 SLFN14P0C7P3 912 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 POMGNT1Q8WZA1 660 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 SMYD2Q9NRG4 433 aa15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 NOP53Q9NZM5 478 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 DIS3Q9Y2L1 958 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-217ENST00000581241 GNGT2O14610 69 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 TCP11X2Q5H9J9 407 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 GLG1Q92896 1179 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 PLAAQ9Y263 795 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 ERVV-2B6SEH9 535 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 TRPA1O75762 1119 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 PPWD1Q96BP3 646 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 CCDC127Q96BQ5 260 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms