RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 CHMP4BP1P59074 171 aa24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 RASIP1Q5U651 963 aa24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 PSRC1Q6PGN9 363 aaPredicted RBP24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 FCHSD1Q86WN1 690 aa24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 CTCFLQ8NI51 663 aaPredicted RBP24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 MAP3K14Q99558 947 aa24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 MTA3Q9BTC8 594 aa24.66■■□□□ 1.54
CSNK1D-216ENST00000581108 SH2B2O14492 632 aaPredicted RBP24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 RGS20O76081 388 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 DDAH1O94760 285 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 MMP3P08254 477 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 PGM5Q15124 567 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 NFRKBQ6P4R8 1299 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 NFXL1Q6ZNB6 911 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 VSIG10LQ86VR7 867 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 TMTC2Q8N394 836 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 IL31RAQ8NI17 732 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 SCLYQ96I15 445 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 ZFP91Q96JP5 570 aaPredicted RBP24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 TMEM87BQ96K49 555 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 CDX2Q99626 313 aaPredicted RBP24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 MRVI1Q9Y6F6 885 aa24.65■■□□□ 1.54
CSNK1D-216ENST00000581108 CDH23Q9H251 3354 aa24.64■■□□□ 1.54
CSNK1D-216ENST00000581108 FGBP02675 491 aa24.64■■□□□ 1.54
CSNK1D-216ENST00000581108 KIF5BP33176 963 aa24.64■■□□□ 1.54
CSNK1D-216ENST00000581108 SCN5AQ14524 2016 aa24.63■■□□□ 1.53
CSNK1D-216ENST00000581108 CCDC69A6NI79 296 aa24.63■■□□□ 1.53
CSNK1D-216ENST00000581108 GRXCR1A8MXD5 290 aa24.63■■□□□ 1.53
CSNK1D-216ENST00000581108 SPZ1Q9BXG8 430 aa24.63■■□□□ 1.53
CSNK1D-216ENST00000581108 LRRC2Q9BYS8 371 aa24.63■■□□□ 1.53
CSNK1D-216ENST00000581108 TRIP12Q14669 1992 aaPredicted RBP24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 PLEKHA8P1O95397 391 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 RXRAP19793 462 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 CASTP20810 708 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 DNAJB2P25686 324 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 SMARCA1P28370 1054 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 LIFRP42702 1097 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 PTPN11Q06124 597 aaPredicted RBP24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 LAMC2Q13753 1193 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 OTOP2Q7RTS6 562 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 DHX37Q8IY37 1157 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 CMTR1Q8N1G2 835 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 HERVK_113Q902F9 699 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 KAT2BQ92831 832 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 VWCEQ96DN2 955 aa24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 RRP36Q96EU6 259 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 CXXC1Q9P0U4 656 aaPredicted RBP24.62■■□□□ 1.53
CSNK1D-216ENST00000581108 DGKDQ16760 1214 aa24.61■■□□□ 1.53
CSNK1D-216ENST00000581108 RAB11FIP4Q86YS3 637 aa24.61■■□□□ 1.53
CSNK1D-216ENST00000581108 SRBD1Q8N5C6 995 aaKnown RBP24.61■■□□□ 1.53
CSNK1D-216ENST00000581108 EMID1Q96A84 441 aaPredicted RBP24.61■■□□□ 1.53
CSNK1D-216ENST00000581108 A0A0C4DFX4 3053 aa24.6■■□□□ 1.53
CSNK1D-216ENST00000581108 SORBS3O60504 671 aa24.6■■□□□ 1.53
CSNK1D-216ENST00000581108 CCND2P30279 289 aa24.6■■□□□ 1.53
CSNK1D-216ENST00000581108 RPUSD2Q8IZ73 545 aaKnown RBP24.6■■□□□ 1.53
CSNK1D-216ENST00000581108 LZTS2Q9BRK4 669 aa24.6■■□□□ 1.53
CSNK1D-216ENST00000581108 TMEM265A0A087WTH1 108 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 PBX2P40425 430 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 GNAQP50148 359 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 SP2Q02086 613 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 RNF20Q5VTR2 975 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 MYSM1Q5VVJ2 828 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 KCNV1Q6PIU1 500 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 PPTC7Q8NI37 304 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 MYLIPQ8WY64 445 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 GPKOWQ92917 476 aaPredicted RBP eCLIP24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 PBX4Q9BYU1 374 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 SEC63Q9UGP8 760 aaKnown RBP24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 SLC12A7Q9Y666 1083 aa24.59■■□□□ 1.53
CSNK1D-216ENST00000581108 GBF1Q92538 1859 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 CDC45O75419 566 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 CALM1P0DP23 149 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 CALM2P0DP24 149 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 CALM3P0DP25 149 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 PTGISQ16647 500 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 CELF3Q5SZQ8 465 aaKnown RBP24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 USP17L6PQ6QN14 398 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 DEFB128Q7Z7B8 93 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 TIFAQ96CG3 184 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 NOD1Q9Y239 953 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 MYO9BQ13459 2157 aa24.58■■□□□ 1.53
CSNK1D-216ENST00000581108 EYSQ5T1H1 3165 aa24.58■■□□□ 1.52
CSNK1D-216ENST00000581108 GGPS1O95749 300 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 TGFB3P10600 412 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 MRPS9P82933 396 aaKnown RBP24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 HSDL1Q3SXM5 330 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 GDF6Q6KF10 455 aaPredicted RBP24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 SESTD1Q86VW0 696 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 CCDC82Q8N4S0 544 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 FANCBQ8NB91 859 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 SPATA33Q96N06 139 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 NEK1Q96PY6 1258 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 CTAGE1Q96RT6 745 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 ALG1Q9BT22 464 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 MTIF3Q9H2K0 278 aaKnown RBP24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 BCAS3Q9H6U6 928 aa24.57■■□□□ 1.52
CSNK1D-216ENST00000581108 hCG_1642624A0A1W2PR95 340 aa24.56■■□□□ 1.52
CSNK1D-216ENST00000581108 ZNF286BP0CG31 522 aa24.56■■□□□ 1.52
CSNK1D-216ENST00000581108 UBA1P22314 1058 aaKnown RBP24.56■■□□□ 1.52
CSNK1D-216ENST00000581108 PSEN2P49810 448 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms