RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 UBA5Q9GZZ9 404 aa12.01□□□□□ -0.49
GGA3-210ENST00000580799 MYH6P13533 1939 aa12.01□□□□□ -0.49
GGA3-210ENST00000580799 PTPRSQ13332 1948 aa12.01□□□□□ -0.49
GGA3-210ENST00000580799 RFXAPO00287 272 aa12□□□□□ -0.49
GGA3-210ENST00000580799 EFCAB14O75071 495 aa12□□□□□ -0.49
GGA3-210ENST00000580799 EIF3JO75822 258 aaKnown RBP12□□□□□ -0.49
GGA3-210ENST00000580799 PARP1P09874 1014 aaKnown RBP12□□□□□ -0.49
GGA3-210ENST00000580799 WDR5P61964 334 aaKnown RBP12□□□□□ -0.49
GGA3-210ENST00000580799 LAMC2Q13753 1193 aa12□□□□□ -0.49
GGA3-210ENST00000580799 LY6KQ17RY6 165 aa12□□□□□ -0.49
GGA3-210ENST00000580799 ARHGEF16Q5VV41 709 aa12□□□□□ -0.49
GGA3-210ENST00000580799 GDF6Q6KF10 455 aaPredicted RBP12□□□□□ -0.49
GGA3-210ENST00000580799 CNKSR3Q6P9H4 555 aa12□□□□□ -0.49
GGA3-210ENST00000580799 LRRC8DQ7L1W4 858 aa12□□□□□ -0.49
GGA3-210ENST00000580799 C7orf31Q8N865 590 aa12□□□□□ -0.49
GGA3-210ENST00000580799 ENAHQ8N8S7 591 aaPredicted RBP12□□□□□ -0.49
GGA3-210ENST00000580799 ARNTL2Q8WYA1 636 aa12□□□□□ -0.49
GGA3-210ENST00000580799 KAT2BQ92831 832 aa12□□□□□ -0.49
GGA3-210ENST00000580799 CTAGE1Q96RT6 745 aa12□□□□□ -0.49
GGA3-210ENST00000580799 LNPKQ9C0E8 428 aa12□□□□□ -0.49
GGA3-210ENST00000580799 CPVLQ9H3G5 476 aa12□□□□□ -0.49
GGA3-210ENST00000580799 CERS4Q9HA82 394 aa12□□□□□ -0.49
GGA3-210ENST00000580799 MAP3K20Q9NYL2 800 aaKnown RBP12□□□□□ -0.49
GGA3-210ENST00000580799 COL20A1Q9P218 1284 aa12□□□□□ -0.49
GGA3-210ENST00000580799 GTF2IRD1Q9UHL9 959 aa12□□□□□ -0.49
GGA3-210ENST00000580799 REV3LO60673 3130 aa12□□□□□ -0.49
GGA3-210ENST00000580799 NCOR1O75376 2440 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 ABHD14A-ACY1A0A1B0GW23 586 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 HIP1O00291 1037 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 DHX16O60231 1041 aaKnown RBP11.99□□□□□ -0.49
GGA3-210ENST00000580799 F2P00734 622 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 CXCL10P02778 98 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 KCNQ1P51787 676 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 GHRHRQ02643 423 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 IMMTQ16891 758 aaKnown RBP11.99□□□□□ -0.49
GGA3-210ENST00000580799 QRICH1Q2TAL8 776 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 KCNV1Q6PIU1 500 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 CHST3Q7LGC8 479 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 SMC5Q8IY18 1101 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 PPTC7Q8NI37 304 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 TBC1D5Q92609 795 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 HLA-CQ95604 372 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 ZBED2Q9BTP6 218 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 DSCC1Q9BVC3 393 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 KRT23Q9C075 422 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 OSBPL3Q9H4L5 887 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 CNNM2Q9H8M5 875 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 JMJD4Q9H9V9 463 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 PXMP2Q9NR77 195 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 DIAPH3Q9NSV4 1193 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 LMCD1Q9NZU5 365 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 CTNNA3Q9UI47 895 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 DDX41Q9UJV9 622 aaKnown RBP11.99□□□□□ -0.49
GGA3-210ENST00000580799 MRVI1Q9Y6F6 885 aa11.99□□□□□ -0.49
GGA3-210ENST00000580799 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 B4E1Z4 1266 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 PPFIA4O75335 1185 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 ARHGEF15O94989 841 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 NR3C2P08235 984 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 CKBP12277 381 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 HOXD8P13378 290 aaPredicted RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 PSEN2P49810 448 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 TRAF1Q13077 416 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 PTK7Q13308 1070 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 GRB10Q13322 594 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 IKBKEQ14164 716 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 GPNMBQ14956 572 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 CWC27Q6UX04 472 aaKnown RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 DHX37Q8IY37 1157 aaKnown RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 SAMD3Q8N6K7 520 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 DHX38Q92620 1227 aaKnown RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 NECAB3Q96P71 396 aaPredicted RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 UBAC1Q9BSL1 405 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 AMNQ9BXJ7 453 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 RWDD1Q9H446 243 aaPredicted RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 ZSWIM5Q9P217 1185 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 XIRP2A4UGR9 3374 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 PRRC2BQ5JSZ5 2229 aaKnown RBP11.98□□□□□ -0.49
GGA3-210ENST00000580799 TET1Q8NFU7 2136 aa11.98□□□□□ -0.49
GGA3-210ENST00000580799 EMSYQ7Z589 1322 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 HAS3O00219 553 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 LPXNO60711 386 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 GJB5O95377 273 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 CFBP00751 764 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 HSD17B4P51659 736 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 MFSD10Q14728 455 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 KIAA0753Q2KHM9 967 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 KRT40Q6A162 431 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 STOX1Q6ZVD7 989 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 CHD1LQ86WJ1 897 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 PLEKHM2Q8IWE5 1019 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 RAD9AQ99638 391 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 TCF20Q9UGU0 1960 aaKnown RBP11.97□□□□□ -0.49
GGA3-210ENST00000580799 SIP14410 1827 aa11.97□□□□□ -0.49
GGA3-210ENST00000580799 LCHNA4D1U4 455 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 KLRF2D3W0D1 207 aa11.96□□□□□ -0.49
GGA3-210ENST00000580799 NBNO60934 754 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms