RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
TOP3A-210ENST00000580713 PHOX2BQ99453 314 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 C17orf80Q9BSJ5 609 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
TOP3A-210ENST00000580713 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
TOP3A-210ENST00000580713 APPP05067 770 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 ZP2Q05996 745 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 PDE4DQ08499 809 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 IKBKEQ14164 716 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 NEK9Q8TD19 979 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 COPS5Q92905 334 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 MRPL38Q96DV4 380 aaKnown RBP12.68□□□□□ -0.38
TOP3A-210ENST00000580713 GMCL1Q96IK5 515 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 PRKAG3Q9UGI9 489 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 PRR12Q9ULL5 1215 aa12.68□□□□□ -0.38
TOP3A-210ENST00000580713 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-210ENST00000580713 A6NJR5 290 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 ST18O60284 1047 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 EFCAB14O75071 495 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 PARNO95453 639 aaKnown RBP12.67□□□□□ -0.38
TOP3A-210ENST00000580713 CALML3P27482 149 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 TFAP4Q01664 338 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 PDE4BQ07343 736 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 GPNMBQ14956 572 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 TIGD5Q53EQ6 642 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 GDF6Q6KF10 455 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-210ENST00000580713 ADHFE1Q8IWW8 467 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 NEDD1Q8NHV4 660 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 MPHOSPH6Q99547 160 aaKnown RBP12.67□□□□□ -0.38
TOP3A-210ENST00000580713 INSL6Q9Y581 213 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 TANC1Q9C0D5 1861 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
TOP3A-210ENST00000580713 PLA2G6O60733 806 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 NBNO60934 754 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 TXNP10599 105 aaKnown RBP12.66□□□□□ -0.38
TOP3A-210ENST00000580713 CCDC96Q2M329 555 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 TCTN1Q2MV58 587 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 TCEAL5Q5H9L2 206 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 SMC5Q8IY18 1101 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 SCFD2Q8WU76 684 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 PABPC5Q96DU9 382 aaKnown RBP12.66□□□□□ -0.38
TOP3A-210ENST00000580713 CLDND1Q9NY35 253 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 PTPRSQ13332 1948 aa12.66□□□□□ -0.38
TOP3A-210ENST00000580713 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 NFIBO00712 420 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 RAB11FIP3O75154 756 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 CXCL10P02778 98 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 ICAM1P05362 532 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 CKBP12277 381 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 IRS1P35568 1242 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 PTPN5P54829 565 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 GPM6BQ13491 265 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
TOP3A-210ENST00000580713 MYOCDQ8IZQ8 938 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 DHX38Q92620 1227 aaKnown RBP12.65□□□□□ -0.38
TOP3A-210ENST00000580713 DCTPP1Q9H773 170 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 EPB41L4AQ9HCS5 686 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-210ENST00000580713 MUTYHQ9UIF7 546 aa12.65□□□□□ -0.38
TOP3A-210ENST00000580713 WDFY4Q6ZS81 3184 aa12.65□□□□□ -0.39
TOP3A-210ENST00000580713 ZNF318Q5VUA4 2279 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 GPAA1O43292 621 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 AMHP03971 560 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 SLC3A2P08195 630 aaKnown RBP12.64□□□□□ -0.39
TOP3A-210ENST00000580713 GNAT2P19087 354 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 CLUL1Q15846 466 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 EPC2Q52LR7 807 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 SLC30A10Q6XR72 485 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.64□□□□□ -0.39
TOP3A-210ENST00000580713 CHST3Q7LGC8 479 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 PRSS33Q8NF86 280 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 AFG1LQ8WV93 481 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 OSBP2Q969R2 916 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 SAMD11Q96NU1 681 aa12.64□□□□□ -0.39
TOP3A-210ENST00000580713 POP1Q99575 1024 aaKnown RBP12.64□□□□□ -0.39
TOP3A-210ENST00000580713 SIP14410 1827 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 B4DLN1 442 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 RBAK-RBAKDNI3L0D1 243 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 SLC16A2P36021 539 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 MRPL12P52815 198 aaKnown RBP12.63□□□□□ -0.39
TOP3A-210ENST00000580713 RNF207Q6ZRF8 634 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 RASGRP2Q7LDG7 609 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 C7orf31Q8N865 590 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 APPBP2Q92624 585 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 CTAGE1Q96RT6 745 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 YME1L1Q96TA2 773 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 NSUN3Q9H649 340 aaKnown RBP12.63□□□□□ -0.39
TOP3A-210ENST00000580713 PLIN4Q96Q06 1357 aa12.63□□□□□ -0.39
TOP3A-210ENST00000580713 TSPY2A6NKD2 308 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 H3BNC9 293 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 LGR5O75473 907 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 ARIH2O95376 493 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms