RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 SLC45A1Q9Y2W3 748 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 MRVI1Q9Y6F6 885 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 IGLV3-22A0A075B6J6 115 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 A0A1B0GVL5 298 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 GCOM1H8Y6P7 765 aaPredicted RBP9.04□□□□□ -0.96
KPNB1-210ENST00000580573 NFIBO00712 420 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 TBX3O15119 743 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 CTAGE5O15320 804 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 SLC37A4O43826 429 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 NEMFO60524 1076 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 TDP2O95551 362 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 OR52Z1P0C646 297 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 POLR2MP0CAP2 368 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 ZBTB48P10074 688 aaPredicted RBP9.04□□□□□ -0.96
KPNB1-210ENST00000580573 ARHGAP4P98171 946 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 LETM2Q2VYF4 491 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 Q4G0T1 1027 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 CST9Q5W186 159 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 FASTKD5Q7L8L6 764 aaKnown RBP9.04□□□□□ -0.96
KPNB1-210ENST00000580573 MCF2L2Q86YR7 1114 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 IGSF22Q8N9C0 903 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 AK8Q96MA6 479 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 TEX13BQ9BXU2 312 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 NUP62CLQ9H1M0 184 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 RABGAP1Q9Y3P9 1069 aa9.04□□□□□ -0.96
KPNB1-210ENST00000580573 SPDYE3A6NKU9 549 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 CCNT1O60563 726 aaKnown RBP9.03□□□□□ -0.96
KPNB1-210ENST00000580573 CNMDO75829 334 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 ZNF202O95125 648 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 ATP2B1P20020 1258 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 SNAPC2Q13487 334 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 TTLL12Q14166 644 aaPredicted RBP9.03□□□□□ -0.96
KPNB1-210ENST00000580573 TMEM132AQ24JP5 1023 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 MUM1L1Q5H9M0 696 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 LRSAM1Q6UWE0 723 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 RIOX2Q8IUF8 465 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 ETNPPLQ8TBG4 499 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 SYTL5Q8TDW5 730 aaPredicted RBP9.03□□□□□ -0.96
KPNB1-210ENST00000580573 TBC1D5Q92609 795 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 HAS1Q92839 578 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 CCSER1Q9C0I3 900 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 ASCC2Q9H1I8 757 aaPredicted RBP9.03□□□□□ -0.96
KPNB1-210ENST00000580573 RAVER2Q9HCJ3 691 aaKnown RBP9.03□□□□□ -0.96
KPNB1-210ENST00000580573 COL20A1Q9P218 1284 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 KCNH3Q9ULD8 1083 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 RIPK3Q9Y572 518 aa9.03□□□□□ -0.96
KPNB1-210ENST00000580573 A0A087X0B3 334 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SYCE3A1L190 88 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 VWA3AA6NCI4 1184 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 FAM86B1E9PN63 330 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SLC26A4O43511 780 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 KINO60870 393 aaKnown RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 CELF2O95319 508 aaKnown RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 CFBP00751 764 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 FAM86B2P0C5J1 330 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 BCRP11274 1271 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 HOXA13P31271 388 aaPredicted RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SYKP43405 635 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 GTF2A2P52657 109 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 HERVK_113P62684 666 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 RPS6P62753 249 aaKnown RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 MDM2Q00987 491 aaPredicted RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SPIRE1Q08AE8 756 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 PABPC4Q13310 644 aaKnown RBP eCLIP9.02□□□□□ -0.971e-5■□□□□ 8.9
KPNB1-210ENST00000580573 HIC1Q14526 733 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 PDIA5Q14554 519 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SPRYD7Q5W111 196 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SNRNP48Q6IEG0 339 aaKnown RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 KRBA2Q6ZNG9 492 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 NIPA1Q7RTP0 329 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SH3RF1Q7Z6J0 888 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 GAS2L3Q86XJ1 694 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 C2orf69Q8N8R5 385 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 CHST13Q8NET6 341 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 GTF3C2Q8WUA4 911 aaPredicted RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SYMPKQ92797 1274 aaKnown RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 TRERF1Q96PN7 1200 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 PYM1Q9BRP8 204 aaKnown RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 GZF1Q9H116 711 aaPredicted RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 RNF146Q9NTX7 359 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 FAM13BQ9NYF5 915 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 DDX25Q9UHL0 483 aaKnown RBP9.02□□□□□ -0.97
KPNB1-210ENST00000580573 USP25Q9UHP3 1055 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 MCM3APO60318 1980 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 DOCK5Q9H7D0 1870 aa9.02□□□□□ -0.97
KPNB1-210ENST00000580573 ARID2Q68CP9 1835 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 MEIS1O00470 390 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 MGAMO43451 1857 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 CETPP11597 493 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 ALAS1P13196 640 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 COPB2P35606 906 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 STAT3P40763 770 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 CALCRLQ16602 461 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 NAALADL2Q58DX5 795 aa9.01□□□□□ -0.97
KPNB1-210ENST00000580573 HYIQ5T013 277 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms