RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 MRPL11Q9Y3B7 192 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SPDYE16A6NNV3 312 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 OR52Z1P0C646 297 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SH3D19Q5HYK7 790 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SARM1Q6SZW1 724 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 RBM46Q8TBY0 533 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 FERMT2Q96AC1 680 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CENPFP49454 3210 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 BMP15O95972 392 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 KARSQ15046 597 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CALCRLQ16602 461 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PRR16Q569H4 304 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CST9Q5W186 159 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SNRNP48Q6IEG0 339 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 NSMFQ6X4W1 530 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ZNF579Q8NAF0 562 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 REPS2Q8NFH8 660 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 HAS1Q92839 578 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ZNF214Q9UL59 606 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PCDHA5Q9Y5H7 936 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SCN4AP35499 1836 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 WDR90Q96KV7 1748 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CBX1P83916 185 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 MRFAP1L1Q96HT8 127 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 MTMR9Q96QG7 549 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 HOOK1Q9UJC3 728 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 A0A0G2JLL6 359 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 POTEMA6NI47 508 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PRRT2Q7Z6L0 340 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 LRRC8AQ8IWT6 810 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CRYGNQ8WXF5 182 aa14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PHIPQ8WWQ0 1821 aa14.27□□□□□ -0.12
CDK5RAP3-217ENST00000580287 FAM237AA0A1B0GTK4 181 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ATP1A3P13637 1013 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 AFMP43652 599 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 RPS6P62753 249 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ARL6IP4Q66PJ3 421 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 LRRC15Q8TF66 581 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 GBA2Q9HCG7 927 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 IFNKQ9P0W0 207 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ABCB11O95342 1321 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SMTNL1A8MU46 457 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PIK3CDO00329 1044 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 AP3B2Q13367 1082 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MOGSQ13724 837 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 POSTNQ15063 836 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PPP4R3AQ6IN85 833 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 IL31RAQ8NI17 732 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 NUDT12Q9BQG2 462 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PAGR1Q9BTK6 254 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 GLT8D2Q9H1C3 349 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 RNF146Q9NTX7 359 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 BTBD7Q9P203 1132 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TUBE1Q9UJT0 475 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ADAMTS5Q9UNA0 930 aa14.27□□□□□ -0.13
CDK5RAP3-217ENST00000580287 OTOFQ9HC10 1997 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 DCAF8L1A6NGE4 600 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MARCH6O60337 910 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TNNT1P13805 278 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CDC25BP30305 580 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SREBF1P36956 1147 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TPD52L1Q16890 204 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TAAR1Q96RJ0 339 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ASCC2Q9H1I8 757 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 HOXC10Q9NYD6 342 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ACTN4O43707 911 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ITGBL1O95965 494 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SKILP12757 684 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ZNF76P36508 570 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 STAT3P40763 770 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PPIL2Q13356 520 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 BAATQ14032 418 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 LENG9Q96B70 501 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 BPIFA3Q9BQP9 254 aa14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 XPO4Q9C0E2 1151 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CXCL11O14625 94 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CYP2C8P10632 490 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 EIF2AK2P19525 551 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 USP11P51784 963 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 GOLGA8FQ08AF8 430 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 GOLGA8DPQ0D2H9 430 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SYTL5Q8TDW5 730 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TXNRD2Q9NNW7 524 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 KCNH4Q9UQ05 1017 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 FOSP01100 380 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 LONP1P36776 959 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 IRX3P78415 501 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 RASSF8Q8NHQ8 419 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SMARCE1Q969G3 411 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MMTAG2Q9BU76 263 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PKD2L1Q9P0L9 805 aa14.25□□□□□ -0.13
CDK5RAP3-217ENST00000580287 UBA7P41226 1012 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 HSD17B4P51659 736 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 Q3C1V9 767 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 GPAT2Q6NUI2 795 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MTRQ99707 1265 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■□□□□ 10.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms