RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 KAT2BQ92831 832 aa22.72■■□□□ 1.23
LIMD2-209ENST00000580222 FAM227BQ96M60 508 aa22.72■■□□□ 1.23
LIMD2-209ENST00000580222 RANBP17Q9H2T7 1088 aaKnown RBP22.72■■□□□ 1.23
LIMD2-209ENST00000580222 ZNF287Q9HBT7 754 aa22.72■■□□□ 1.23
LIMD2-209ENST00000580222 ADD3Q9UEY8 706 aaKnown RBP22.72■■□□□ 1.23
LIMD2-209ENST00000580222 TANC1Q9C0D5 1861 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 A0A0D9SFI3 127 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 PTPDC1A2A3K4 754 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 PATL2C9JE40 543 aaKnown RBP22.71■■□□□ 1.23
LIMD2-209ENST00000580222 KPNA6O60684 536 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 EDNRBP24530 442 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 CALML3P27482 149 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 MBTPS1Q14703 1052 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.71■■□□□ 1.23
LIMD2-209ENST00000580222 CAGE1Q8TC20 777 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 WNT8BQ93098 351 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 SEC62Q99442 399 aaKnown RBP22.71■■□□□ 1.23
LIMD2-209ENST00000580222 HELLSQ9NRZ9 838 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 STX8Q9UNK0 236 aa22.71■■□□□ 1.23
LIMD2-209ENST00000580222 TXNP10599 105 aaKnown RBP22.7■■□□□ 1.22
LIMD2-209ENST00000580222 CKBP12277 381 aa22.7■■□□□ 1.22
LIMD2-209ENST00000580222 ZP2Q05996 745 aa22.7■■□□□ 1.22
LIMD2-209ENST00000580222 CWC27Q6UX04 472 aaKnown RBP22.7■■□□□ 1.22
LIMD2-209ENST00000580222 AFG1LQ8WV93 481 aa22.7■■□□□ 1.22
LIMD2-209ENST00000580222 ABHD14A-ACY1A0A1B0GW23 586 aa22.69■■□□□ 1.22
LIMD2-209ENST00000580222 C19orf67A6NJJ6 358 aa22.69■■□□□ 1.22
LIMD2-209ENST00000580222 NKRFO15226 690 aaKnown RBP eCLIP22.69■■□□□ 1.22
LIMD2-209ENST00000580222 CDC45O75419 566 aa22.69■■□□□ 1.22
LIMD2-209ENST00000580222 CHMLP26374 656 aa22.69■■□□□ 1.22
LIMD2-209ENST00000580222 BRDTQ58F21 947 aaPredicted RBP22.69■■□□□ 1.22
LIMD2-209ENST00000580222 FBXO22Q8NEZ5 403 aa22.69■■□□□ 1.22
LIMD2-209ENST00000580222 SCFD2Q8WU76 684 aa22.69■■□□□ 1.22
LIMD2-209ENST00000580222 PDE4DQ08499 809 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 RBL2Q08999 1139 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 MCMDC2Q4G0Z9 681 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 CCDC62Q6P9F0 684 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 CASC1Q6TDU7 716 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 SESTD1Q86VW0 696 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 RUFY2Q8WXA3 655 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 MRPL38Q96DV4 380 aaKnown RBP22.68■■□□□ 1.22
LIMD2-209ENST00000580222 KCNH6Q9H252 994 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.68■■□□□ 1.22
LIMD2-209ENST00000580222 CFAP54Q96N23 3096 aa22.68■■□□□ 1.22
LIMD2-209ENST00000580222 RAD50Q92878 1312 aa22.67■■□□□ 1.22
LIMD2-209ENST00000580222 LOC102724159A0A0B4J2E5 919 aa22.67■■□□□ 1.22
LIMD2-209ENST00000580222 GNAT2P19087 354 aa22.67■■□□□ 1.22
LIMD2-209ENST00000580222 PDE4BQ07343 736 aa22.67■■□□□ 1.22
LIMD2-209ENST00000580222 PPARAQ07869 468 aa22.67■■□□□ 1.22
LIMD2-209ENST00000580222 PWP2Q15269 919 aaKnown RBP22.67■■□□□ 1.22
LIMD2-209ENST00000580222 TRIM71Q2Q1W2 868 aaKnown RBP22.67■■□□□ 1.22
LIMD2-209ENST00000580222 CCDC155Q8N6L0 562 aa22.67■■□□□ 1.22
LIMD2-209ENST00000580222 MFAP1P55081 439 aaKnown RBP22.66■■□□□ 1.22
LIMD2-209ENST00000580222 RPS6P62753 249 aaKnown RBP22.66■■□□□ 1.22
LIMD2-209ENST00000580222 ZNF200P98182 395 aaPredicted RBP22.66■■□□□ 1.22
LIMD2-209ENST00000580222 MKRN4PQ13434 485 aaPredicted RBP22.66■■□□□ 1.22
LIMD2-209ENST00000580222 CCDC96Q2M329 555 aa22.66■■□□□ 1.22
LIMD2-209ENST00000580222 TCEAL5Q5H9L2 206 aa22.66■■□□□ 1.22
LIMD2-209ENST00000580222 BTNL9Q6UXG8 535 aa22.66■■□□□ 1.22
LIMD2-209ENST00000580222 RNF207Q6ZRF8 634 aa22.66■■□□□ 1.22
LIMD2-209ENST00000580222 HDAC6Q9UBN7 1215 aa22.66■■□□□ 1.22
LIMD2-209ENST00000580222 CCDC171Q6TFL3 1326 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 FOXP2O15409 715 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 MMP3P08254 477 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 IRS1P35568 1242 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 NOVP48745 357 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 CTDSPL2Q05D32 466 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 ARHGAP1Q07960 439 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 IKBKEQ14164 716 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 HIC1Q14526 733 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 COL19A1Q14993 1142 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 LY6KQ17RY6 165 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 PUS10Q3MIT2 529 aaKnown RBP22.65■■□□□ 1.22
LIMD2-209ENST00000580222 EPC2Q52LR7 807 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 ZNF618Q5T7W0 954 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 SYDE2Q5VT97 1194 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 GPCPD1Q9NPB8 672 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 ZNF318Q5VUA4 2279 aa22.65■■□□□ 1.22
LIMD2-209ENST00000580222 FRMPD2Q68DX3 1309 aaPredicted RBP22.64■■□□□ 1.22
LIMD2-209ENST00000580222 LTBRP36941 435 aa22.64■■□□□ 1.21
LIMD2-209ENST00000580222 HTRA4P83105 476 aaPredicted RBP22.64■■□□□ 1.21
LIMD2-209ENST00000580222 ZNF589Q86UQ0 364 aaPredicted RBP22.64■■□□□ 1.21
LIMD2-209ENST00000580222 BANK1Q8NDB2 785 aa22.64■■□□□ 1.21
LIMD2-209ENST00000580222 PRSS33Q8NF86 280 aa22.64■■□□□ 1.21
LIMD2-209ENST00000580222 SP7Q8TDD2 431 aaPredicted RBP22.64■■□□□ 1.21
LIMD2-209ENST00000580222 PABPC5Q96DU9 382 aaKnown RBP22.64■■□□□ 1.21
LIMD2-209ENST00000580222 GTF2IRD1Q9UHL9 959 aa22.64■■□□□ 1.21
LIMD2-209ENST00000580222 INSL6Q9Y581 213 aa22.64■■□□□ 1.21
LIMD2-209ENST00000580222 TRIP12Q14669 1992 aaPredicted RBP22.63■■□□□ 1.21
LIMD2-209ENST00000580222 IER5LQ5T953 404 aa22.63■■□□□ 1.21
LIMD2-209ENST00000580222 EP400NLQ6ZTU2 488 aa22.63■■□□□ 1.21
LIMD2-209ENST00000580222 CHST3Q7LGC8 479 aa22.63■■□□□ 1.21
LIMD2-209ENST00000580222 ADHFE1Q8IWW8 467 aa22.63■■□□□ 1.21
LIMD2-209ENST00000580222 DCAF4Q8WV16 495 aa22.63■■□□□ 1.21
LIMD2-209ENST00000580222 OSBPL7Q9BZF2 842 aa22.63■■□□□ 1.21
LIMD2-209ENST00000580222 TSPY2A6NKD2 308 aa22.62■■□□□ 1.21
LIMD2-209ENST00000580222 TBC1D5Q92609 795 aa22.62■■□□□ 1.21
LIMD2-209ENST00000580222 MUTYHQ9UIF7 546 aa22.62■■□□□ 1.21
LIMD2-209ENST00000580222 SGSM2O43147 1006 aa22.61■■□□□ 1.21
LIMD2-209ENST00000580222 PARNO95453 639 aaKnown RBP22.61■■□□□ 1.21
LIMD2-209ENST00000580222 MYOCDQ8IZQ8 938 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms