RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ARVCFO00192 962 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 NOP56O00567 594 aaKnown RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 PPFIA3O75145 1194 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 STAM2O75886 525 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 CLTBP09497 229 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 TGFB3P10600 412 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 PDIA3P30101 505 aaKnown RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 CDC27P30260 824 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 ZNF76P36508 570 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 MAGEA10P43363 369 aaPredicted RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 ADCY7P51828 1080 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 ANAPC15P60006 121 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 PSMC6P62333 389 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 SSRP1Q08945 709 aaKnown RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 ITGA7Q13683 1181 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 ANKRD1Q15327 319 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 DGKDQ16760 1214 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 UBE2SQ16763 222 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 HABP4Q5JVS0 413 aaKnown RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 C1orf53Q5VUE5 145 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 CCSAPQ6IQ19 270 aaPredicted RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 XRRA1Q6P2D8 792 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 NLRX1Q86UT6 975 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 AFG1LQ8WV93 481 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 COPS5Q92905 334 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 PHKBQ93100 1093 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 SPATA33Q96N06 139 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 MTG1Q9BT17 334 aaPredicted RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 SLC26A6Q9BXS9 759 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 NCOA5Q9HCD5 579 aaKnown RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 C6orf50Q9HD87 102 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 RBM27Q9P2N5 1060 aaKnown RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 NOD1Q9Y239 953 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 PLXNB2O15031 1838 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 RANBP2P49792 3224 aaKnown RBP7.52□□□□□ -1.21
TRAF4-213ENST00000578917 MROH7Q68CQ1 1323 aa7.52□□□□□ -1.21
TRAF4-213ENST00000578917 TRIOBPQ9H2D6 2365 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 ZNF236Q9UL36 1845 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 A6NJR5 290 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 hCG_1984214I3L0E3 225 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 PIK3CDO00329 1044 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 MEIS2O14770 477 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 PRPF3O43395 683 aaKnown RBP7.51□□□□□ -1.21
TRAF4-213ENST00000578917 CDKL5O76039 1030 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 ARIH2O95376 493 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 FOSP01100 380 aaPredicted RBP7.51□□□□□ -1.21
TRAF4-213ENST00000578917 SUPT20HL2P0C7V6 817 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 SCG2P13521 617 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 NEK4P51957 841 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 GHRHRQ02643 423 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 NEDD9Q14511 834 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 WWC2Q6AWC2 1192 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 CCDC62Q6P9F0 684 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 FBXL16Q8N461 479 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 ZNF713Q8N859 430 aaPredicted RBP7.51□□□□□ -1.21
TRAF4-213ENST00000578917 C7orf31Q8N865 590 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 IL31RAQ8NI17 732 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 BADQ92934 168 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 ZNF274Q96GC6 653 aaPredicted RBP7.51□□□□□ -1.21
TRAF4-213ENST00000578917 TOX2Q96NM4 488 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 SEZ6LQ9BYH1 1024 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 SLKQ9H2G2 1235 aaPredicted RBP7.51□□□□□ -1.21
TRAF4-213ENST00000578917 RIC8AQ9NPQ8 531 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 FAM217BQ9NTX9 383 aaPredicted RBP7.51□□□□□ -1.21
TRAF4-213ENST00000578917 BARHL2Q9NY43 387 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
TRAF4-213ENST00000578917 PCDHA6Q9UN73 950 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 PCDHA8Q9Y5H6 950 aa7.51□□□□□ -1.21
TRAF4-213ENST00000578917 COL11A1P12107 1806 aaPredicted RBP7.5□□□□□ -1.21
TRAF4-213ENST00000578917 TRIM43BA6NCK2 446 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 STXBP3O00186 592 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 CTAGE5O15320 804 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 FIBPO43427 364 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 PPFIA4O75335 1185 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 GGPS1O95749 300 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 GNA11P29992 359 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 CDK7P50613 346 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 NLRP5P59047 1200 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 NKX3-2P78367 333 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 PURAQ00577 322 aaKnown RBP7.5□□□□□ -1.21
TRAF4-213ENST00000578917 SP4Q02446 784 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 ARHGAP1Q07960 439 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 FAAP100Q0VG06 881 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 FUT2Q10981 343 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 TOB2Q14106 344 aaPredicted RBP7.5□□□□□ -1.21
TRAF4-213ENST00000578917 SNX17Q15036 470 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 PFKFB3Q16875 520 aaPredicted RBP7.5□□□□□ -1.21
TRAF4-213ENST00000578917 NBPF20Q3BBV1 942 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 CELF3Q5SZQ8 465 aaKnown RBP7.5□□□□□ -1.21
TRAF4-213ENST00000578917 JAKMIP3Q5VZ66 844 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 PCNX4Q63HM2 1172 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 MCTP2Q6DN12 878 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 PPP1R18Q6NYC8 613 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 CYFIP1Q7L576 1253 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 ANKRD33Q7Z3H0 272 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 SH3RF1Q7Z6J0 888 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 GIMAP8Q8ND71 665 aaPredicted RBP7.5□□□□□ -1.21
TRAF4-213ENST00000578917 BICD2Q8TD16 824 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 TRIM43Q96BQ3 446 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms