RNA–Protein interactions for RNA: ENST00000578660.1

AC004477.1-201, humanhuman

Gene AC004477.1, Length 2,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004477.1-201ENST00000578660 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 ANO3Q9BYT9 981 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 CNOT7Q9UIV1 285 aaKnown RBP11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 FEM1BQ9UK73 627 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 PRR12Q9ULL5 1215 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 TFR2Q9UP52 801 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 PPP2R2CQ9Y2T4 447 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 ECE1P42892 770 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 DCAF15Q66K64 600 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 NEK11Q8NG66 645 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 TEPSINQ96N21 525 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 IMPACTQ9P2X3 320 aa11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 DDX25Q9UHL0 483 aaKnown RBP11.64□□□□□ -0.55
AC004477.1-201ENST00000578660 CASQ1P31415 396 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 RANBP17Q9H2T7 1088 aaKnown RBP11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 STK17AQ9UEE5 414 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 SH3BP1Q9Y3L3 701 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 GJA3Q9Y6H8 435 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 CYP3A7-CYP3A51PA0A087WV96 503 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 SHTN1A0MZ66 631 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 PHF20L1A8MW92 1017 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 H7C1D1 291 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 PIK3CDO00329 1044 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 PHACTR2O75167 634 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 TDP2O95551 362 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 CYP3A7P24462 503 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 TERF2Q15554 542 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 TMCO3Q6UWJ1 677 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 MIGA2Q7L4E1 593 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 LPAR1Q92633 364 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 CCDC47Q96A33 483 aaKnown RBP11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 GDAP1L1Q96MZ0 367 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 MBOAT7Q96N66 472 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 SLC37A4O43826 429 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 CTNND1O60716 968 aaKnown RBP11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 AMPD3Q01432 767 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 MCM6Q14566 821 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 KCNB1Q14721 858 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 NLGN2Q8NFZ4 835 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 VPS16Q9H269 839 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 SPON1Q9HCB6 807 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
AC004477.1-201ENST00000578660 ZNF541Q9H0D2 1346 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 SPDYE3A6NKU9 549 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 MEIS2O14770 477 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 RHOXF2BP0C7M4 288 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 TECP42680 631 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 SPICE1Q8N0Z3 855 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 KCTD17Q8N5Z5 321 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 RHOXF2Q9BQY4 288 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 EHMT1Q9H9B1 1298 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 SUGCTQ9HAC7 445 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 LRWD1Q9UFC0 647 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 STK24Q9Y6E0 443 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 ABCB11O95342 1321 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 SYNRGQ9UMZ2 1314 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 RPN1P04843 607 aaKnown RBP11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 LMNB1P20700 586 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 TXKP42681 527 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 NAALADL2Q58DX5 795 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 ZNF658Q5TYW1 1059 aaPredicted RBP11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 TRIM65Q6PJ69 517 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 VSTM4Q8IW00 320 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 REXO1L1PQ8IX06 675 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 UIMC1Q96RL1 719 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 ZNF341Q9BYN7 854 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 LRRC27Q9C0I9 530 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 PNMA2Q9UL42 364 aa11.62□□□□□ -0.55
AC004477.1-201ENST00000578660 KDM3AQ9Y4C1 1321 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 RBBP6Q7Z6E9 1792 aaKnown RBP11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 PP2D1A8MPX8 630 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 TBX3O15119 743 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 EDIL3O43854 480 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 PLCG1P19174 1290 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 SREBF1P36956 1147 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 PPP1R2P41236 205 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 PRELPP51888 382 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 GPC2Q8N158 579 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 CDK5RAP3Q96JB5 506 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 MED15Q96RN5 788 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 KIAA1683Q9H0B3 1180 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 MRPL44Q9H9J2 332 aaKnown RBP11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 MRPL11Q9Y3B7 192 aaKnown RBP11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 USP17L15C9J2P7 530 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 USP17L13C9JLJ4 530 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 USP17L11C9JVI0 530 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 USP17L18D6R9N7 530 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 USP17L22D6RA61 530 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 USP17L17D6RBQ6 530 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 USP17L19D6RCP7 530 aa11.61□□□□□ -0.55
AC004477.1-201ENST00000578660 USP17L20D6RJB6 530 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms