RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 NUDT19A8MXV4 375 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 F8W031 263 aaPredicted RBP3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 ARVCFO00192 962 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 PEX10O60683 326 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 DGKIO75912 1065 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 CLSTN1O94985 981 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 RAPGEF3O95398 923 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 CRTAMO95727 393 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 SOD2P04179 222 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 SDHBP21912 280 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 SLC6A11P48066 632 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 MAPKAPK2P49137 400 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 YBX1P67809 324 aaKnown RBP3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 PABPC4Q13310 644 aaKnown RBP eCLIP3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 RAB3GAP1Q15042 981 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 CHRNA2Q15822 529 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 MLANAQ16655 118 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 PLEKHG4Q58EX7 1191 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 RPTNQ6XPR3 784 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 KIAA0907Q7Z7F0 614 aaPredicted RBP3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 SEC14L1Q92503 715 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 CLUHP3Q96NS8 147 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 AP5M1Q9H0R1 490 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 NSUN3Q9H649 340 aaKnown RBP3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 TRIM39Q9HCM9 518 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 DCP1AQ9NPI6 582 aaPredicted RBP3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.25□□□□□ -1.893e-10■■□□□ 14.3
PTP4A1-204ENST00000578299 KLHL14Q9P2G3 628 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 DBR1Q9UK59 544 aaKnown RBP3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 PLAAQ9Y263 795 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 PCDHA9Q9Y5H5 950 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 PCDHA8Q9Y5H6 950 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 CD2APQ9Y5K6 639 aa3.25□□□□□ -1.89
PTP4A1-204ENST00000578299 TCRBV16S1A1N1A0A5B0 115 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 ZC3H12DA2A288 527 aaKnown RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 B4E1Z4 1266 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 WNT9AO14904 365 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 GSTA4O15217 222 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 PAX4O43316 350 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 SMARCA5O60264 1052 aaPredicted RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 ZBTB7AO95365 584 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 ASLP04424 464 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 PRR5P85299 388 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 SPIRE1Q08AE8 756 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 SLC9A5Q14940 896 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 TKFCQ3LXA3 575 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 PLEKHN1Q494U1 663 aaPredicted RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 FAM47CQ5HY64 1035 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 CYP4F22Q6NT55 531 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 ZC3H14Q6PJT7 736 aaKnown RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 PRR23BQ6ZRT6 265 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 BRAPQ7Z569 592 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 ZNF605Q86T29 641 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 ZC3H7AQ8IWR0 971 aaKnown RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 FBXO15Q8NCQ5 510 aaPredicted RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 PCDH19Q8TAB3 1148 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 PANK1Q8TE04 598 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 NINJ1Q92982 152 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 FBXW5Q969U6 566 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 TSPAN17Q96FV3 270 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 SCLYQ96I15 445 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 DIRC2Q96SL1 478 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 JAM3Q9BX67 310 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 SLKQ9H2G2 1235 aaPredicted RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 IPPKQ9H8X2 491 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 INTS7Q9NVH2 962 aaKnown RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 PPARGC1AQ9UBK2 798 aaKnown RBP3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 NUB1Q9Y5A7 615 aa3.24□□□□□ -1.89
PTP4A1-204ENST00000578299 TEX51A0A1B0GUA7 166 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 KRIT1O00522 736 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 HGSO14964 777 aaPredicted RBP3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 MAFKO60675 156 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 SEMA7AO75326 666 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 RASGRP1O95267 797 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 NPTXRO95502 500 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 GNAT1P11488 350 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 VIPR1P32241 457 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 IGFALSP35858 605 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 FLT3P36888 993 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 ST5P78524 1137 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 SRSF3P84103 164 aaKnown RBP3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 EMC4Q5J8M3 183 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 HABP4Q5JVS0 413 aaKnown RBP3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 STEAP3Q658P3 488 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 C16orf59Q7L2K0 433 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 OTOP3Q7RTS5 596 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 TMC6Q7Z403 805 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 FGD2Q7Z6J4 655 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 NIM1KQ8IY84 436 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 MFSD3Q96ES6 412 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 KCNJ15Q99712 375 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 RXFP1Q9HBX9 757 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 SLC6A20Q9NP91 592 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 SIRT5Q9NXA8 310 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 MAGEC2Q9UBF1 373 aaPredicted RBP3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 ZNF652Q9Y2D9 606 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 RNF114Q9Y508 228 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 CADPSQ9ULU8 1353 aa3.23□□□□□ -1.89
PTP4A1-204ENST00000578299 MYOCOSA0A1B0GUC4 107 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms