RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 PIK3CDO00329 1044 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 KPNA6O60684 536 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 STAM2O75886 525 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 ARIH2O95376 493 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 PTGS1P23219 599 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 CDC27P30260 824 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 ANAPC15P60006 121 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 LY6KQ17RY6 165 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 TMEM63BQ5T3F8 832 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 USP17L6PQ6QN14 398 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 VSIG10LQ86VR7 867 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 COPS5Q92905 334 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 TOX2Q96NM4 488 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
GGA3-204ENST00000578208 GLT8D2Q9H1C3 349 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 PDLIM7Q9NR12 457 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 PDRG1Q9NUG6 133 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 V9GY48 417 aaPredicted RBP13.36□□□□□ -0.27
GGA3-204ENST00000578208 A0A1W2PPC1 479 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 ADD1P35611 737 aaKnown RBP13.35□□□□□ -0.27
GGA3-204ENST00000578208 ADCY7P51828 1080 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
GGA3-204ENST00000578208 ITGA7Q13683 1181 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 CCDC62Q6P9F0 684 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 ANKRD33Q7Z3H0 272 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 TEX2Q8IWB9 1127 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 DHX37Q8IY37 1157 aaKnown RBP13.35□□□□□ -0.27
GGA3-204ENST00000578208 IL31RAQ8NI17 732 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 CCDC12Q8WUD4 166 aaPredicted RBP13.35□□□□□ -0.27
GGA3-204ENST00000578208 GDF15Q99988 308 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
GGA3-204ENST00000578208 UBE2OQ9C0C9 1292 aaKnown RBP13.35□□□□□ -0.27
GGA3-204ENST00000578208 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 FRMPD4Q14CM0 1322 aa13.35□□□□□ -0.27
GGA3-204ENST00000578208 MEIS2O14770 477 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 CPLX1O14810 134 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 RAG1P15918 1043 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 BMP8BP34820 402 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 PURAQ00577 322 aaKnown RBP13.34□□□□□ -0.27
GGA3-204ENST00000578208 ARHGAP1Q07960 439 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 FUT2Q10981 343 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 LAMC2Q13753 1193 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 UBE2SQ16763 222 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 PCNX4Q63HM2 1172 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 CPLX2Q6PUV4 134 aaKnown RBP13.34□□□□□ -0.27
GGA3-204ENST00000578208 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
GGA3-204ENST00000578208 BARHL2Q9NY43 387 aa13.34□□□□□ -0.27
GGA3-204ENST00000578208 DDX41Q9UJV9 622 aaKnown RBP13.34□□□□□ -0.27
GGA3-204ENST00000578208 KIAA1217Q5T5P2 1943 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 A6NJR5 290 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 STXBP3O00186 592 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 FIBPO43427 364 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 MMP3P08254 477 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 TGFB3P10600 412 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 SCG2P13521 617 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
GGA3-204ENST00000578208 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
GGA3-204ENST00000578208 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
GGA3-204ENST00000578208 DGKDQ16760 1214 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 PFKFB3Q16875 520 aaPredicted RBP13.33□□□□□ -0.28
GGA3-204ENST00000578208 NLRX1Q86UT6 975 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 TRIM22Q8IYM9 498 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 AFG1LQ8WV93 481 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 SLC26A6Q9BXS9 759 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 RIC8AQ9NPQ8 531 aa13.33□□□□□ -0.28
GGA3-204ENST00000578208 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 SMCO2A6NFE2 343 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 KIAA0355O15063 1070 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 PRPF3O43395 683 aaKnown RBP13.32□□□□□ -0.28
GGA3-204ENST00000578208 GGPS1O95749 300 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 FOSP01100 380 aaPredicted RBP13.32□□□□□ -0.28
GGA3-204ENST00000578208 CDK7P50613 346 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 EVCP57679 992 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 CHMP4BP1P59074 171 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 PSMC6P62333 389 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 FAAP100Q0VG06 881 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 NEDD9Q14511 834 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 FAM47CQ5HY64 1035 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 SH3RF1Q7Z6J0 888 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 TDHQ8IZJ6 230 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 SLC43A3Q8NBI5 491 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 EMID1Q96A84 441 aaPredicted RBP13.32□□□□□ -0.28
GGA3-204ENST00000578208 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
GGA3-204ENST00000578208 ZNF274Q96GC6 653 aaPredicted RBP13.32□□□□□ -0.28
GGA3-204ENST00000578208 ZFP91Q96JP5 570 aaPredicted RBP13.32□□□□□ -0.28
GGA3-204ENST00000578208 CDHR1Q96JP9 859 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 INPP4AQ96PE3 977 aaPredicted RBP13.32□□□□□ -0.28
GGA3-204ENST00000578208 RNF26Q9BY78 433 aaPredicted RBP13.32□□□□□ -0.28
GGA3-204ENST00000578208 PRO3102Q9H379 93 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 MLXIPQ9HAP2 919 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 PCDHA6Q9UN73 950 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 PCDHA8Q9Y5H6 950 aa13.32□□□□□ -0.28
GGA3-204ENST00000578208 CEP290O15078 2479 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 NOP56O00567 594 aaKnown RBP13.31□□□□□ -0.28
GGA3-204ENST00000578208 RGS20O76081 388 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 SUPT20HL2P0C7V6 817 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms