RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 GUCD1Q96NT3 240 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 PIGSQ96S52 555 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 PPP1R12CQ9BZL4 782 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 PDGFCQ9NRA1 345 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 KIAA1217Q5T5P2 1943 aa14.77□□□□□ -0.04
CCDC57-211ENST00000578187 PNMA6FA0A0J9YX94 578 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 OPLAHO14841 1288 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 SEC24BO95487 1268 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 EPHB4P54760 987 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 RPS6P62753 249 aaKnown RBP14.77□□□□□ -0.05
CCDC57-211ENST00000578187 GHRHRQ02643 423 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 PPP2R5BQ15173 497 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 MCF2L2Q86YR7 1114 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 OR6J1Q8NGC5 347 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 SCFD2Q8WU76 684 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 BRF1Q92994 677 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 PURBQ96QR8 312 aaKnown RBP14.77□□□□□ -0.05
CCDC57-211ENST00000578187 SEMA6BQ9H3T3 888 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 HIPK3Q9H422 1215 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 RBM28Q9NW13 759 aaKnown RBP14.77□□□□□ -0.05
CCDC57-211ENST00000578187 MRPL11Q9Y3B7 192 aaKnown RBP14.77□□□□□ -0.05
CCDC57-211ENST00000578187 CYP46A1Q9Y6A2 500 aa14.77□□□□□ -0.05
CCDC57-211ENST00000578187 CNTNAP5Q8WYK1 1306 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 CD4P01730 458 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 SUPT20HL2P0C7V6 817 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 CSF2RAP15509 400 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 EVCP57679 992 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 FGD1P98174 961 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 APOBRQ0VD83 1088 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 TRAF1Q13077 416 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 RTN1Q16799 776 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 SLC43A3Q8NBI5 491 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 RRP36Q96EU6 259 aaKnown RBP14.76□□□□□ -0.05
CCDC57-211ENST00000578187 CDX2Q99626 313 aaPredicted RBP14.76□□□□□ -0.05
CCDC57-211ENST00000578187 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.76□□□□□ -0.051e-7■■□□□ 11.9
CCDC57-211ENST00000578187 PCDHA1Q9Y5I3 950 aa14.76□□□□□ -0.05
CCDC57-211ENST00000578187 DDX49Q9Y6V7 483 aaKnown RBP14.76□□□□□ -0.05
CCDC57-211ENST00000578187 LAMA2P24043 3122 aaKnown RBP14.76□□□□□ -0.05
CCDC57-211ENST00000578187 RBM47A0AV96 593 aaKnown RBP14.75□□□□□ -0.05
CCDC57-211ENST00000578187 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
CCDC57-211ENST00000578187 GOLGA8BA8MQT2 603 aa14.75□□□□□ -0.05
CCDC57-211ENST00000578187 KPNA6O60684 536 aa14.75□□□□□ -0.05
CCDC57-211ENST00000578187 MYL3P08590 195 aa14.75□□□□□ -0.05
CCDC57-211ENST00000578187 FUT2Q10981 343 aa14.75□□□□□ -0.05
CCDC57-211ENST00000578187 TOB2Q14106 344 aaPredicted RBP14.75□□□□□ -0.05
CCDC57-211ENST00000578187 TTLL4Q14679 1199 aa14.75□□□□□ -0.05
CCDC57-211ENST00000578187 CMTR1Q8N1G2 835 aaKnown RBP14.75□□□□□ -0.05
CCDC57-211ENST00000578187 MTG1Q9BT17 334 aaPredicted RBP14.75□□□□□ -0.05
CCDC57-211ENST00000578187 UPF3BQ9BZI7 483 aaKnown RBP14.75□□□□□ -0.05
CCDC57-211ENST00000578187 FAM217BQ9NTX9 383 aaPredicted RBP14.75□□□□□ -0.05
CCDC57-211ENST00000578187 FOSL2P15408 326 aa14.74□□□□□ -0.05
CCDC57-211ENST00000578187 DNAJB2P25686 324 aa14.74□□□□□ -0.05
CCDC57-211ENST00000578187 CYP2C18P33260 490 aa14.74□□□□□ -0.05
CCDC57-211ENST00000578187 METAP2P50579 478 aaKnown RBP eCLIP14.74□□□□□ -0.05
CCDC57-211ENST00000578187 HSD17B4P51659 736 aa14.74□□□□□ -0.05
CCDC57-211ENST00000578187 PSMC6P62333 389 aa14.74□□□□□ -0.05
CCDC57-211ENST00000578187 RPUSD2Q8IZ73 545 aaKnown RBP14.74□□□□□ -0.05
CCDC57-211ENST00000578187 SAMD3Q8N6K7 520 aa14.74□□□□□ -0.05
CCDC57-211ENST00000578187 SYTL5Q8TDW5 730 aaPredicted RBP14.74□□□□□ -0.05
CCDC57-211ENST00000578187 NSUN6Q8TEA1 469 aaKnown RBP14.74□□□□□ -0.05
CCDC57-211ENST00000578187 TBC1D5Q92609 795 aa14.74□□□□□ -0.05
CCDC57-211ENST00000578187 IL23AQ9NPF7 189 aa14.74□□□□□ -0.05
CCDC57-211ENST00000578187 SEC63Q9UGP8 760 aaKnown RBP14.74□□□□□ -0.05
CCDC57-211ENST00000578187 B4GALT4O60513 344 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 FGBP02675 491 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 TXNP10599 105 aaKnown RBP14.73□□□□□ -0.05
CCDC57-211ENST00000578187 EDNRBP24530 442 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 CDC27P30260 824 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 PURAQ00577 322 aaKnown RBP14.73□□□□□ -0.05
CCDC57-211ENST00000578187 FAM47CQ5HY64 1035 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 TMEM240Q5SV17 173 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 ZNF365Q70YC5 407 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.73□□□□□ -0.05
CCDC57-211ENST00000578187 MAFAQ8NHW3 353 aaPredicted RBP14.73□□□□□ -0.05
CCDC57-211ENST00000578187 PIBF1Q8WXW3 757 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 TIFAQ96CG3 184 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 ALDH8A1Q9H2A2 487 aaPredicted RBP14.73□□□□□ -0.05
CCDC57-211ENST00000578187 MAP3K20Q9NYL2 800 aaKnown RBP14.73□□□□□ -0.05
CCDC57-211ENST00000578187 COL20A1Q9P218 1284 aa14.73□□□□□ -0.05
CCDC57-211ENST00000578187 ACRP10323 421 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 RAB30Q15771 203 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 STXBP2Q15833 593 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 ARHGEF16Q5VV41 709 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 MYLIPQ8WY64 445 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 IWS1Q96ST2 819 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 TRPV6Q9H1D0 765 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 TTYH1Q9H313 450 aaPredicted RBP14.72□□□□□ -0.05
CCDC57-211ENST00000578187 PDRG1Q9NUG6 133 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 MSRAQ9UJ68 235 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 NAP1L2Q9ULW6 460 aaPredicted RBP14.72□□□□□ -0.05
CCDC57-211ENST00000578187 NOD1Q9Y239 953 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 GTF3C3Q9Y5Q9 886 aa14.72□□□□□ -0.05
CCDC57-211ENST00000578187 GRIN2DO15399 1336 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 CCDC196A0A1B0GTZ2 297 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 CFBP00751 764 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 PFKMP08237 780 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 PTGS1P23219 599 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 PDIA3P30101 505 aaKnown RBP14.71□□□□□ -0.05
CCDC57-211ENST00000578187 CCL23P55773 120 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 TMEM63BQ5T3F8 832 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms