RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 CCND2P30279 289 aa22.21■■□□□ 1.15
SS18-208ENST00000577751 ATN1P54259 1190 aaPredicted RBP22.21■■□□□ 1.15
SS18-208ENST00000577751 MRPS9P82933 396 aaKnown RBP22.21■■□□□ 1.15
SS18-208ENST00000577751 BEX3Q00994 111 aa22.21■■□□□ 1.15
SS18-208ENST00000577751 FSCN1Q16658 493 aaKnown RBP22.21■■□□□ 1.15
SS18-208ENST00000577751 SEPT14Q6ZU15 432 aa22.21■■□□□ 1.15
SS18-208ENST00000577751 KIF2CQ99661 725 aa22.21■■□□□ 1.15
SS18-208ENST00000577751 RIC8AQ9NPQ8 531 aa22.21■■□□□ 1.15
SS18-208ENST00000577751 NR2E3Q9Y5X4 410 aa22.21■■□□□ 1.15
SS18-208ENST00000577751 STAM2O75886 525 aa22.2■■□□□ 1.14
SS18-208ENST00000577751 RBM25P49756 843 aaKnown RBP22.2■■□□□ 1.14
SS18-208ENST00000577751 NEK4P51957 841 aa22.2■■□□□ 1.14
SS18-208ENST00000577751 STK3Q13188 491 aa22.2■■□□□ 1.14
SS18-208ENST00000577751 UBE2SQ16763 222 aa22.2■■□□□ 1.14
SS18-208ENST00000577751 COPS5Q92905 334 aa22.2■■□□□ 1.14
SS18-208ENST00000577751 SLC26A6Q9BXS9 759 aa22.2■■□□□ 1.14
SS18-208ENST00000577751 DDX41Q9UJV9 622 aaKnown RBP22.2■■□□□ 1.14
SS18-208ENST00000577751 SMCO2A6NFE2 343 aa22.19■■□□□ 1.14
SS18-208ENST00000577751 H0YGN5 161 aa22.19■■□□□ 1.14
SS18-208ENST00000577751 PFKFB2O60825 505 aa22.19■■□□□ 1.14
SS18-208ENST00000577751 AKAP17AQ02040 695 aaKnown RBP22.19■■□□□ 1.14
SS18-208ENST00000577751 SCRN1Q12765 414 aa22.19■■□□□ 1.14
SS18-208ENST00000577751 PCNX4Q63HM2 1172 aa22.19■■□□□ 1.14
SS18-208ENST00000577751 OR6J1Q8NGC5 347 aa22.19■■□□□ 1.14
SS18-208ENST00000577751 C22orf23Q9BZE7 217 aa22.19■■□□□ 1.14
SS18-208ENST00000577751 GLT8D2Q9H1C3 349 aa22.19■■□□□ 1.14
SS18-208ENST00000577751 SLKQ9H2G2 1235 aaPredicted RBP22.19■■□□□ 1.14
SS18-208ENST00000577751 ELP1O95163 1332 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 ESYT2A0FGR8 921 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 CPLX1O14810 134 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 CLK2P49760 499 aaKnown RBP22.18■■□□□ 1.14
SS18-208ENST00000577751 ADCY7P51828 1080 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 LY6KQ17RY6 165 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 XRRA1Q6P2D8 792 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 KCNV1Q6PIU1 500 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 C7orf61Q8IZ16 206 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 GLT1D1Q96MS3 346 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 ZMYND12Q9H0C1 365 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 STARD7Q9NQZ5 370 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 PCDHA6Q9UN73 950 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 PCDHA8Q9Y5H6 950 aa22.18■■□□□ 1.14
SS18-208ENST00000577751 DNAH12Q6ZR08 3092 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 A6NJR5 290 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 SPDYE3A6NKU9 549 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 ZEB2O60315 1214 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 PPFIA3O75145 1194 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 TGFB3P10600 412 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 RTP1P59025 263 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 ARHGAP1Q07960 439 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 SSRP1Q08945 709 aaKnown RBP22.17■■□□□ 1.14
SS18-208ENST00000577751 CPLX2Q6PUV4 134 aaKnown RBP22.17■■□□□ 1.14
SS18-208ENST00000577751 TRIM22Q8IYM9 498 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 ZFP91Q96JP5 570 aaPredicted RBP22.17■■□□□ 1.14
SS18-208ENST00000577751 INPP4AQ96PE3 977 aaPredicted RBP22.17■■□□□ 1.14
SS18-208ENST00000577751 MRVI1Q9Y6F6 885 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 MYH7BA7E2Y1 1941 aa22.17■■□□□ 1.14
SS18-208ENST00000577751 CABYRO75952 493 aa22.16■■□□□ 1.14
SS18-208ENST00000577751 FOSP01100 380 aaPredicted RBP22.16■■□□□ 1.14
SS18-208ENST00000577751 GH1P01241 217 aa22.16■■□□□ 1.14
SS18-208ENST00000577751 ICAM3P32942 547 aa22.16■■□□□ 1.14
SS18-208ENST00000577751 CPT1AP50416 773 aa22.16■■□□□ 1.14
SS18-208ENST00000577751 ME3Q16798 604 aa22.16■■□□□ 1.14
SS18-208ENST00000577751 CXCL17Q6UXB2 119 aa22.16■■□□□ 1.14
SS18-208ENST00000577751 CCDC12Q8WUD4 166 aaPredicted RBP22.16■■□□□ 1.14
SS18-208ENST00000577751 EMID1Q96A84 441 aaPredicted RBP22.16■■□□□ 1.14
SS18-208ENST00000577751 DEXIO95424 95 aa22.15■■□□□ 1.14
SS18-208ENST00000577751 CDK7P50613 346 aa22.15■■□□□ 1.14
SS18-208ENST00000577751 GNPTABQ3T906 1256 aa22.15■■□□□ 1.14
SS18-208ENST00000577751 TRIM60Q495X7 471 aa22.15■■□□□ 1.14
SS18-208ENST00000577751 SH3GLB2Q9NR46 395 aa22.15■■□□□ 1.14
SS18-208ENST00000577751 SPATA31C2B4DYI2 1134 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 ADAMTS3O15072 1205 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 LARGE1O95461 756 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 SP2Q02086 613 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 AP3B2Q13367 1082 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 C6orf50Q9HD87 102 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 POLR3EQ9NVU0 708 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 RTEL1Q9NZ71 1219 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 ATP11BQ9Y2G3 1177 aa22.14■■□□□ 1.13
SS18-208ENST00000577751 CDKL5O76039 1030 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 CTDNEP1O95476 244 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 GNA11P29992 359 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 PURAQ00577 322 aaKnown RBP22.13■■□□□ 1.13
SS18-208ENST00000577751 SEMA3FQ13275 785 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 LAMC2Q13753 1193 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 BRDTQ58F21 947 aaPredicted RBP22.13■■□□□ 1.13
SS18-208ENST00000577751 MYSM1Q5VVJ2 828 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 ANKRD33Q7Z3H0 272 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 SLC43A3Q8NBI5 491 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 CCDC148Q8NFR7 591 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 TOX2Q96NM4 488 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 EHMT1Q9H9B1 1298 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 TMEM260Q9NX78 707 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 VPS54Q9P1Q0 977 aa22.13■■□□□ 1.13
SS18-208ENST00000577751 GRIN2DO15399 1336 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 STK36Q9NRP7 1315 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 A0A0U1RQG5 324 aaPredicted RBP22.12■■□□□ 1.13
SS18-208ENST00000577751 ARVCFO00192 962 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 FIBPO43427 364 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 KPNA6O60684 536 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms