RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 DDX41Q9UJV9 622 aaKnown RBP15.74■□□□□ 0.11
CUEDC1-204ENST00000577497 STXBP5LQ9Y2K9 1186 aa15.74■□□□□ 0.11
CUEDC1-204ENST00000577497 UNC80Q8N2C7 3258 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 GRXCR1A8MXD5 290 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 GCOM1H8Y6P7 765 aaPredicted RBP15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 SORBS3O60504 671 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 POLR2MP0CAP2 368 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 CHMP4BP1P59074 171 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 BRDTQ58F21 947 aaPredicted RBP15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 FAM47CQ5HY64 1035 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 RASIP1Q5U651 963 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 NFXL1Q6ZNB6 911 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 CTCFLQ8NI51 663 aaPredicted RBP15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 KAT2BQ92831 832 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 SPZ1Q9BXG8 430 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 SEZ6LQ9BYH1 1024 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 IL23AQ9NPF7 189 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 CXXC1Q9P0U4 656 aaPredicted RBP15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
CUEDC1-204ENST00000577497 VSIG10LQ86VR7 867 aa15.72■□□□□ 0.11
CUEDC1-204ENST00000577497 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
CUEDC1-204ENST00000577497 TMEM87BQ96K49 555 aa15.72■□□□□ 0.11
CUEDC1-204ENST00000577497 TCEANC2Q96MN5 208 aa15.72■□□□□ 0.11
CUEDC1-204ENST00000577497 MAP3K14Q99558 947 aa15.72■□□□□ 0.11
CUEDC1-204ENST00000577497 MTA3Q9BTC8 594 aa15.72■□□□□ 0.11
CUEDC1-204ENST00000577497 SEMA6BQ9H3T3 888 aa15.72■□□□□ 0.11
CUEDC1-204ENST00000577497 MAP3K20Q9NYL2 800 aaKnown RBP15.72■□□□□ 0.11
CUEDC1-204ENST00000577497 hCG_1642624A0A1W2PR95 340 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 CCDC69A6NI79 296 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 KPNA6O60684 536 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 KIF5BP33176 963 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 PBX2P40425 430 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 SP2Q02086 613 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 ADCK5Q3MIX3 580 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 NFRKBQ6P4R8 1299 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 PSRC1Q6PGN9 363 aaPredicted RBP15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 CTAGE1Q96RT6 745 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 CDX2Q99626 313 aaPredicted RBP15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
CUEDC1-204ENST00000577497 FRMPD4Q14CM0 1322 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 CDC45O75419 566 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 ZNF286BP0CG31 522 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 UBA1P22314 1058 aaKnown RBP15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 DNAJB2P25686 324 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 LIFRP42702 1097 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 MRPS9P82933 396 aaKnown RBP15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 USP17L6PQ6QN14 398 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 OTOP2Q7RTS6 562 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 SAMD3Q8N6K7 520 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 EMID1Q96A84 441 aaPredicted RBP15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 RRP36Q96EU6 259 aaKnown RBP15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 CHD9Q3L8U1 2897 aa15.7■□□□□ 0.1
CUEDC1-204ENST00000577497 SCN5AQ14524 2016 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 MEIS2O14770 477 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 SUPT20HL2P0C7V6 817 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 CCND2P30279 289 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 TRAF1Q13077 416 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 HSDL1Q3SXM5 330 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 MYSM1Q5VVJ2 828 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 GDF6Q6KF10 455 aaPredicted RBP15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 MICU3Q86XE3 530 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 DHX37Q8IY37 1157 aaKnown RBP15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 TMTC2Q8N394 836 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 CCDC82Q8N4S0 544 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 SLC17A8Q8NDX2 589 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 PPTC7Q8NI37 304 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 MYLIPQ8WY64 445 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 HERVK_113Q902F9 699 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 PBX4Q9BYU1 374 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 SLC12A7Q9Y666 1083 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 PRUNE2Q8WUY3 3088 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 TANC1Q9C0D5 1861 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 A0A0C4DFX4 3053 aa15.69■□□□□ 0.1
CUEDC1-204ENST00000577497 GGPS1O95749 300 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 FGBP02675 491 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 CASTP20810 708 aaKnown RBP15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 SMARCA1P28370 1054 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 EXOSC10Q01780 885 aaKnown RBP15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 PTPN11Q06124 597 aaPredicted RBP15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 SEMA3FQ13275 785 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 LAMC2Q13753 1193 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 PTGISQ16647 500 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 DGKDQ16760 1214 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 CELF3Q5SZQ8 465 aaKnown RBP15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 TMTC3Q6ZXV5 915 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 DEFB128Q7Z7B8 93 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 SGMS1Q86VZ5 419 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 FANCBQ8NB91 859 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 CCDC136Q96JN2 1154 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 NEK1Q96PY6 1258 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 LZTS2Q9BRK4 669 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 RTEL1Q9NZ71 1219 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 SEC63Q9UGP8 760 aaKnown RBP15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 BRPF3Q9ULD4 1205 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 TELO2Q9Y4R8 837 aa15.68■□□□□ 0.1
CUEDC1-204ENST00000577497 MYH7BA7E2Y1 1941 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms