RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MAPK4P31152 587 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 IDH3AP50213 366 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 CACNB2Q08289 660 aaPredicted RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 TTF1Q15361 905 aaPredicted RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 HIF1AQ16665 826 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 KIAA1755Q5JYT7 1200 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 MAP3K21Q5TCX8 1036 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 WDR78Q5VTH9 848 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 FOXR1Q6PIV2 292 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 FIGNL1Q6PIW4 674 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 CATSPERGQ6ZRH7 1159 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 NECAB2Q7Z6G3 386 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 PLEKHH3Q7Z736 793 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 ATCAYQ86WG3 371 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 TREML1Q86YW5 311 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 C7orf61Q8IZ16 206 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 KCTD17Q8N5Z5 321 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 CRNKL1Q9BZJ0 848 aaKnown RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 KIAA1683Q9H0B3 1180 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 PRO3102Q9H379 93 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 TUT1Q9H6E5 874 aaKnown RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 RPAP3Q9H6T3 665 aaPredicted RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 CABP5Q9NP86 173 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 DCP1AQ9NPI6 582 aaPredicted RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 PAG1Q9NWQ8 432 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 FLRT1Q9NZU1 646 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 STAP2Q9UGK3 403 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 DMGDHQ9UI17 866 aaKnown RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 RCAN3Q9UKA8 241 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 HCN2Q9UL51 889 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 ZMYND8Q9ULU4 1186 aaPredicted RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 DDX19BQ9UMR2 479 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 GNEQ9Y223 722 aaKnown RBP7.51□□□□□ -1.21
NUP88-212ENST00000576708 NR2E3Q9Y5X4 410 aa7.51□□□□□ -1.21
NUP88-212ENST00000576708 DDX60LQ5H9U9 1706 aaKnown RBP7.5□□□□□ -1.21
NUP88-212ENST00000576708 NAV1Q8NEY1 1877 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 RAB11FIP3O75154 756 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 HMMRO75330 724 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 MAPTP10636 758 aaKnown RBP7.5□□□□□ -1.21
NUP88-212ENST00000576708 AKR1B1P15121 316 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 ZKSCAN1P17029 563 aaPredicted RBP7.5□□□□□ -1.21
NUP88-212ENST00000576708 SYN1P17600 705 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 ADD2P35612 726 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 RGS2P41220 211 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 TNP2Q05952 138 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 TYRO3Q06418 890 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 SFSWAPQ12872 951 aaKnown RBP7.5□□□□□ -1.21
NUP88-212ENST00000576708 PDE3AQ14432 1141 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 GRIN2CQ14957 1233 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 CERS3Q8IU89 383 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 SIAH1Q8IUQ4 282 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 CCAR1Q8IX12 1150 aaKnown RBP7.5□□□□□ -1.21
NUP88-212ENST00000576708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.5□□□□□ -1.21
NUP88-212ENST00000576708 TRERF1Q96PN7 1200 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 CWC22Q9HCG8 908 aaKnown RBP7.5□□□□□ -1.21
NUP88-212ENST00000576708 BRD7Q9NPI1 651 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 OGDHLQ9ULD0 1010 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 RABGAP1Q9Y3P9 1069 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 ALPK3Q96L96 1907 aa7.5□□□□□ -1.21
NUP88-212ENST00000576708 SOX1O00570 391 aaPredicted RBP7.49□□□□□ -1.21
NUP88-212ENST00000576708 OPLAHO14841 1288 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 ICMTO60725 284 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 XRCC5P13010 732 aaKnown RBP7.49□□□□□ -1.21
NUP88-212ENST00000576708 ATP5JP18859 108 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 CD33P20138 364 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 USP14P54578 494 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 SAMD5Q5TGI4 173 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 TSHZ3Q63HK5 1081 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 GLYCTKQ8IVS8 523 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 SPICE1Q8N0Z3 855 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 STK11IPQ8N1F8 1099 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 TRPV1Q8NER1 839 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 NPLOC4Q8TAT6 608 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 SOCS4Q8WXH5 440 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 IRF7Q92985 503 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 APBA2Q99767 749 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 HAUS7Q99871 368 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 COL25A1Q9BXS0 654 aaPredicted RBP7.49□□□□□ -1.21
NUP88-212ENST00000576708 TANGO6Q9C0B7 1094 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 C11orf49Q9H6J7 331 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 NDFIP2Q9NV92 336 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 PFASO15067 1338 aa7.49□□□□□ -1.21
NUP88-212ENST00000576708 SLC15A5A6NIM6 579 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 SOWAHDA6NJG2 315 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 FAM157BP0CG42 384 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 VSIG8P0DPA2 414 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 CYP2C19P33261 490 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 CDK8P49336 464 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 AAMPQ13685 434 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 GAS6Q14393 721 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 RNFT1Q5M7Z0 435 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 C12orf60Q5U649 245 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 IER5Q5VY09 327 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 TMED8Q6PL24 325 aaPredicted RBP7.48□□□□□ -1.21
NUP88-212ENST00000576708 RGL4Q8IZJ4 473 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 ATG4CQ96DT6 458 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 MOV10L1Q9BXT6 1211 aaKnown RBP7.48□□□□□ -1.21
NUP88-212ENST00000576708 PUS7LQ9H0K6 701 aaKnown RBP7.48□□□□□ -1.21
NUP88-212ENST00000576708 EGFL7Q9UHF1 273 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 ATXN7L1Q9ULK2 861 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms