RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 LMNB2Q03252 620 aa17.62■□□□□ 0.41
SLC12A4-216ENST00000576377 TFCP2Q12800 502 aa17.62■□□□□ 0.41
SLC12A4-216ENST00000576377 ZC3H14Q6PJT7 736 aaKnown RBP17.62■□□□□ 0.41
SLC12A4-216ENST00000576377 PPP2R3CQ969Q6 453 aa17.62■□□□□ 0.41
SLC12A4-216ENST00000576377 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
SLC12A4-216ENST00000576377 NCDNQ9UBB6 729 aa17.62■□□□□ 0.41
SLC12A4-216ENST00000576377 CDH22Q9UJ99 828 aa17.62■□□□□ 0.41
SLC12A4-216ENST00000576377 ITPR1Q14643 2758 aa17.62■□□□□ 0.41
SLC12A4-216ENST00000576377 WDFY3Q8IZQ1 3526 aa17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 RALBP1Q15311 655 aa17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 TRIM71Q2Q1W2 868 aaKnown RBP17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 CHST13Q8NET6 341 aa17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 APOL5Q9BWW9 433 aa17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 IFIH1Q9BYX4 1025 aaKnown RBP17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 A1CFQ9NQ94 594 aaKnown RBP17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 FBXO40Q9UH90 709 aa17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 PLAGL2Q9UPG8 496 aa17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 KIAA1671Q9BY89 1806 aa17.61■□□□□ 0.41
SLC12A4-216ENST00000576377 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.6■□□□□ 0.41
SLC12A4-216ENST00000576377 EEF2P13639 858 aaKnown RBP17.6■□□□□ 0.41
SLC12A4-216ENST00000576377 CYP7A1P22680 504 aa17.6■□□□□ 0.41
SLC12A4-216ENST00000576377 RTP3Q9BQQ7 232 aa17.6■□□□□ 0.41
SLC12A4-216ENST00000576377 WDR11Q9BZH6 1224 aa17.6■□□□□ 0.41
SLC12A4-216ENST00000576377 S1PR5Q9H228 398 aa17.6■□□□□ 0.41
SLC12A4-216ENST00000576377 VTA1Q9NP79 307 aa17.6■□□□□ 0.41
SLC12A4-216ENST00000576377 USP17L12C9JPN9 530 aa17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 USP17L21D6R901 530 aa17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 SP9P0CG40 484 aa17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 PMLP29590 882 aa17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 VARS2Q5ST30 1063 aaKnown RBP17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 GORABQ5T7V8 394 aa17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 LRSAM1Q6UWE0 723 aa17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 ATP8B4Q8TF62 1192 aa17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 IL17RAQ96F46 866 aa17.59■□□□□ 0.41
SLC12A4-216ENST00000576377 CYP2E1P05181 493 aaPredicted RBP17.58■□□□□ 0.4
SLC12A4-216ENST00000576377 CLP1Q92989 425 aaKnown RBP17.58■□□□□ 0.4
SLC12A4-216ENST00000576377 PURBQ96QR8 312 aaKnown RBP17.58■□□□□ 0.4
SLC12A4-216ENST00000576377 ERVK-5Q9HDB9 667 aa17.58■□□□□ 0.4
SLC12A4-216ENST00000576377 AKAP2Q9Y2D5 859 aa17.58■□□□□ 0.4
SLC12A4-216ENST00000576377 COG6Q9Y2V7 657 aa17.58■□□□□ 0.4
SLC12A4-216ENST00000576377 PER2O15055 1255 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 CYP2D6P10635 497 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 PLEKHG4Q58EX7 1191 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 SESTD1Q86VW0 696 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 COPS5Q92905 334 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 DYNLL2Q96FJ2 89 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 OSBPL7Q9BZF2 842 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 GOPCQ9HD26 462 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 PIH1D3Q9NQM4 214 aaKnown RBP17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 RWDD3Q9Y3V2 267 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 NR2E1Q9Y466 385 aa17.57■□□□□ 0.4
SLC12A4-216ENST00000576377 IL16Q14005 1332 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 ADGRA3Q8IWK6 1321 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 A6NJR5 290 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 ZBED4O75132 1171 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 ITGB1P05556 798 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 KCNA4P22459 653 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 TGM1P22735 817 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 WWC1Q8IX03 1113 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 GPR161Q8N6U8 529 aaKnown RBP17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 SPPL3Q8TCT6 385 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 RC3H2Q9HBD1 1191 aaKnown RBP17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 SLC38A10Q9HBR0 1119 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 COPRSQ9NQ92 184 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 USP18Q9UMW8 372 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 CACNA1IQ9P0X4 2223 aa17.56■□□□□ 0.4
SLC12A4-216ENST00000576377 PLXNA4Q9HCM2 1894 aa17.55■□□□□ 0.4
SLC12A4-216ENST00000576377 SHC2P98077 582 aa17.55■□□□□ 0.4
SLC12A4-216ENST00000576377 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
SLC12A4-216ENST00000576377 NEK1Q96PY6 1258 aa17.55■□□□□ 0.4
SLC12A4-216ENST00000576377 ACAD9Q9H845 621 aa17.55■□□□□ 0.4
SLC12A4-216ENST00000576377 LHX6Q9UPM6 363 aa17.55■□□□□ 0.4
SLC12A4-216ENST00000576377 EMSYQ7Z589 1322 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 C1QTNF9BB2RNN3 333 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 KPNA6O60684 536 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 C1QTNF9P0C862 333 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 RING1Q06587 406 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 BRDTQ58F21 947 aaPredicted RBP17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 SYCE2Q6PIF2 218 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 LURAP1LQ8IV03 231 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 SIX5Q8N196 739 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 MORC4Q8TE76 937 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 KIFC2Q96AC6 838 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 TLE6Q9H808 572 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 PARD6AQ9NPB6 346 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 CTDP1Q9Y5B0 961 aaPredicted RBP17.54■□□□□ 0.4
SLC12A4-216ENST00000576377 KINO60870 393 aaKnown RBP17.53■□□□□ 0.4
SLC12A4-216ENST00000576377 UQCRFS1P1P0C7P4 283 aa17.53■□□□□ 0.4
SLC12A4-216ENST00000576377 PTK7Q13308 1070 aa17.53■□□□□ 0.4
SLC12A4-216ENST00000576377 POF1BQ8WVV4 589 aa17.53■□□□□ 0.4
SLC12A4-216ENST00000576377 KAT2BQ92831 832 aa17.53■□□□□ 0.4
SLC12A4-216ENST00000576377 PLVAPQ9BX97 442 aa17.53■□□□□ 0.4
SLC12A4-216ENST00000576377 POMKQ9H5K3 350 aa17.53■□□□□ 0.4
SLC12A4-216ENST00000576377 RNF146Q9NTX7 359 aa17.53■□□□□ 0.4
SLC12A4-216ENST00000576377 RAD50Q92878 1312 aa17.52■□□□□ 0.4
SLC12A4-216ENST00000576377 RBM47A0AV96 593 aaKnown RBP17.52■□□□□ 0.4
SLC12A4-216ENST00000576377 SLC30A4O14863 429 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms