RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 IL31RAQ8NI17 732 aa18.68■□□□□ 0.58
ERCC4-208ENST00000576348 CRYGNQ8WXF5 182 aa18.68■□□□□ 0.58
ERCC4-208ENST00000576348 R3HDMLQ9H3Y0 253 aa18.68■□□□□ 0.58
ERCC4-208ENST00000576348 RNF186Q9NXI6 227 aa18.68■□□□□ 0.58
ERCC4-208ENST00000576348 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
ERCC4-208ENST00000576348 SLC37A4O43826 429 aa18.67■□□□□ 0.58
ERCC4-208ENST00000576348 FCGRTP55899 365 aa18.67■□□□□ 0.58
ERCC4-208ENST00000576348 UBE2HP62256 183 aa18.67■□□□□ 0.58
ERCC4-208ENST00000576348 STXBP2Q15833 593 aa18.67■□□□□ 0.58
ERCC4-208ENST00000576348 Q4G0T1 1027 aa18.67■□□□□ 0.58
ERCC4-208ENST00000576348 ARL6IP4Q66PJ3 421 aaKnown RBP18.67■□□□□ 0.58
ERCC4-208ENST00000576348 DTHD1Q6ZMT9 781 aa18.67■□□□□ 0.58
ERCC4-208ENST00000576348 VWA3AA6NCI4 1184 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 SOWAHBA6NEL2 793 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 ASB14A6NK59 587 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 FAM86B1E9PN63 330 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 STAM2O75886 525 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 FAM86B2P0C5J1 330 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 PRPHP41219 470 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 GRB14Q14449 540 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 VSIG10LQ86VR7 867 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 SLFN12Q8IYM2 578 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 ZFP91Q96JP5 570 aaPredicted RBP18.66■□□□□ 0.58
ERCC4-208ENST00000576348 MXRA8Q9BRK3 442 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 RAB34Q9BZG1 259 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 TMEM60Q9H2L4 133 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 LMBRD1Q9NUN5 540 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 PCDHA7Q9UN72 937 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 SRPRBQ9Y5M8 271 aaKnown RBP18.66■□□□□ 0.58
ERCC4-208ENST00000576348 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
ERCC4-208ENST00000576348 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
ERCC4-208ENST00000576348 DNAJC25-GNG10A0A024R161 153 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 TXKP42681 527 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 GNPTABQ3T906 1256 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 NIPA1Q7RTP0 329 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 SOCS4Q8WXH5 440 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 MBOAT7Q96N66 472 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 NUDT12Q9BQG2 462 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 TCEAL9Q9UHQ7 104 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 FBXO2Q9UK22 296 aaPredicted RBP18.65■□□□□ 0.58
ERCC4-208ENST00000576348 UBIAD1Q9Y5Z9 338 aa18.65■□□□□ 0.58
ERCC4-208ENST00000576348 LOC102724159A0A0B4J2E5 919 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 TBX3O15119 743 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 GADD45BO75293 160 aaPredicted RBP18.64■□□□□ 0.57
ERCC4-208ENST00000576348 EIF3JO75822 258 aaKnown RBP18.64■□□□□ 0.57
ERCC4-208ENST00000576348 MBD3O95983 291 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 TXLNAP40222 546 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 PSMC4P43686 418 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 SP3Q02447 781 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 MAP2K1Q02750 393 aaPredicted RBP18.64■□□□□ 0.57
ERCC4-208ENST00000576348 MAP2K5Q13163 448 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 MTMR1Q13613 665 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 PWP2Q15269 919 aaKnown RBP18.64■□□□□ 0.57
ERCC4-208ENST00000576348 ADALQ6DHV7 355 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 CCDC73Q6ZRK6 1079 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 C4orf32Q8N8J7 132 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 FSIP1Q8NA03 581 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 CYP2W1Q8TAV3 490 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 CDHR1Q96JP9 859 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 CLIC6Q96NY7 704 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 ZNF577Q9BSK1 485 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 CFHR5Q9BXR6 569 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 JADE2Q9NQC1 790 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 FAM13BQ9NYF5 915 aa18.64■□□□□ 0.57
ERCC4-208ENST00000576348 MEIS1O00470 390 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 EDIL3O43854 480 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 RGS2P41220 211 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 MRPS9P82933 396 aaKnown RBP18.63■□□□□ 0.57
ERCC4-208ENST00000576348 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
ERCC4-208ENST00000576348 SKOR2Q2VWA4 1001 aaPredicted RBP18.63■□□□□ 0.57
ERCC4-208ENST00000576348 ZNF792Q3KQV3 632 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 MRPS27Q92552 414 aaKnown RBP18.63■□□□□ 0.57
ERCC4-208ENST00000576348 GPRASP2Q96D09 838 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 FAM20AQ96MK3 541 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 UIMC1Q96RL1 719 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 SAGE1Q9NXZ1 904 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 PKD2L1Q9P0L9 805 aa18.63■□□□□ 0.57
ERCC4-208ENST00000576348 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
ERCC4-208ENST00000576348 RBBP6Q7Z6E9 1792 aaKnown RBP18.63■□□□□ 0.57
ERCC4-208ENST00000576348 IGLV3-22A0A075B6J6 115 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 A0A1W2PQ27 194 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 A0A1W2PQ64 194 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 A0A1W2PQD8 194 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 MSH4O15457 936 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 GAS7O60861 476 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 COBLO75128 1261 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 ITGB5P18084 799 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 LONP1P36776 959 aaKnown RBP18.62■□□□□ 0.57
ERCC4-208ENST00000576348 TECP42680 631 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 MORN1Q5T089 497 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 ZNF467Q7Z7K2 595 aaPredicted RBP18.62■□□□□ 0.57
ERCC4-208ENST00000576348 ZNF579Q8NAF0 562 aaKnown RBP18.62■□□□□ 0.57
ERCC4-208ENST00000576348 RASSF8Q8NHQ8 419 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 MTMR9Q96QG7 549 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 WDR11Q9BZH6 1224 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 CSRNP2Q9H175 543 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 TTC12Q9H892 705 aaPredicted RBP18.62■□□□□ 0.57
ERCC4-208ENST00000576348 KCNMB3Q9NPA1 279 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 PCDHA12Q9UN75 941 aa18.62■□□□□ 0.57
ERCC4-208ENST00000576348 DIS3Q9Y2L1 958 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms