RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 HTTP42858 3142 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 CCDC194A0A1B0GVG4 234 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 ZNF865P0CJ78 1059 aaPredicted RBP15.96■□□□□ 0.15
RPAIN-217ENST00000575711 CCL5P13501 91 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 PDCP20941 246 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 CCND3P30281 292 aaPredicted RBP15.96■□□□□ 0.15
RPAIN-217ENST00000575711 NONOQ15233 471 aaKnown RBP eCLIP15.96■□□□□ 0.15
RPAIN-217ENST00000575711 MTFR1Q15390 333 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 LARP1BQ659C4 914 aaKnown RBP15.96■□□□□ 0.15
RPAIN-217ENST00000575711 TRPV1Q8NER1 839 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 OXER1Q8TDS5 423 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 KATNBL1Q9H079 304 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.96■□□□□ 0.15
RPAIN-217ENST00000575711 UNC93B1Q9H1C4 597 aa15.96■□□□□ 0.15
RPAIN-217ENST00000575711 BTBD18B2RXH4 712 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 SEPT4O43236 478 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 AKR1A1P14550 325 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 MRPS9P82933 396 aaKnown RBP15.95■□□□□ 0.14
RPAIN-217ENST00000575711 ARHGAP4P98171 946 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 NR5A1Q13285 461 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 GNL2Q13823 731 aaKnown RBP15.95■□□□□ 0.14
RPAIN-217ENST00000575711 GNPTABQ3T906 1256 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 TNS4Q8IZW8 715 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 RNF208Q9H0X6 261 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 FAM184BQ9ULE4 1060 aa15.95■□□□□ 0.14
RPAIN-217ENST00000575711 MSCO60682 206 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 ZNF76P36508 570 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 ANP32AP39687 249 aaKnown RBP15.94■□□□□ 0.14
RPAIN-217ENST00000575711 CCDC144BQ3MJ40 725 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 IQSEC1Q6DN90 963 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 TAPT1Q6NXT6 567 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 SEPT14Q6ZU15 432 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 PIK3AP1Q6ZUJ8 805 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 NLRX1Q86UT6 975 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 TBCKQ8TEA7 893 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 SCFD2Q8WU76 684 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 ZFP91Q96JP5 570 aaPredicted RBP15.94■□□□□ 0.14
RPAIN-217ENST00000575711 FOXP1Q9H334 677 aaPredicted RBP15.94■□□□□ 0.14
RPAIN-217ENST00000575711 PDGFCQ9NRA1 345 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 RTEL1Q9NZ71 1219 aa15.94■□□□□ 0.14
RPAIN-217ENST00000575711 DDX20Q9UHI6 824 aaKnown RBP15.94■□□□□ 0.14
RPAIN-217ENST00000575711 CYP3A4P08684 503 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 ADCYAP1R1P41586 468 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 TTLL4Q14679 1199 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 MCTP1Q6DN14 999 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 SPRYD3Q8NCJ5 442 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 CRYGNQ8WXF5 182 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 TNFRSF25Q93038 417 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 ABHD8Q96I13 439 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 INPP4AQ96PE3 977 aaPredicted RBP15.93■□□□□ 0.14
RPAIN-217ENST00000575711 TMEM106CQ9BVX2 250 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 WDR11Q9BZH6 1224 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 PAK6Q9NQU5 681 aaPredicted RBP15.93■□□□□ 0.14
RPAIN-217ENST00000575711 MRVI1Q9Y6F6 885 aa15.93■□□□□ 0.14
RPAIN-217ENST00000575711 LRRC37A2A6NM11 1700 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 RBM47A0AV96 593 aaKnown RBP15.92■□□□□ 0.14
RPAIN-217ENST00000575711 FIBPO43427 364 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 RARBP10826 455 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 USP11P51784 963 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 TNFAIP2Q03169 654 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 INF2Q27J81 1249 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 KCNV1Q6PIU1 500 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 CDHR1Q96JP9 859 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 MXRA8Q9BRK3 442 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 JADE2Q9NQC1 790 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 UBIAD1Q9Y5Z9 338 aa15.92■□□□□ 0.14
RPAIN-217ENST00000575711 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-217ENST00000575711 VPS37CA5D8V6 355 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-217ENST00000575711 RGS20O76081 388 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 GJB1P08034 283 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 TXNP10599 105 aaKnown RBP15.91■□□□□ 0.14
RPAIN-217ENST00000575711 ITGB5P18084 799 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 SYT1P21579 422 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 ICAM3P32942 547 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 CIITAP33076 1130 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 MTMR1Q13613 665 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 CEP55Q53EZ4 464 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 EARS2Q5JPH6 523 aaKnown RBP15.91■□□□□ 0.14
RPAIN-217ENST00000575711 ANO1Q5XXA6 986 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 NEK8Q86SG6 692 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 NOSTRINQ8IVI9 506 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 GPRASP2Q96D09 838 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 DEFB118Q96PH6 123 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 NAP1L4Q99733 375 aaKnown RBP15.91■□□□□ 0.14
RPAIN-217ENST00000575711 MCM3APO60318 1980 aa15.91■□□□□ 0.14
RPAIN-217ENST00000575711 SPATA31C2B4DYI2 1134 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 KIF28PB7ZC32 967 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 NKRFO15226 690 aaKnown RBP eCLIP15.9■□□□□ 0.14
RPAIN-217ENST00000575711 MAFGO15525 162 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 DUSP11O75319 330 aaKnown RBP15.9■□□□□ 0.14
RPAIN-217ENST00000575711 TGFB3P10600 412 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 PDIA4P13667 645 aaKnown RBP15.9■□□□□ 0.14
RPAIN-217ENST00000575711 SMPD1P17405 629 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 U2AF2P26368 475 aaKnown RBP eCLIP15.9■□□□□ 0.14
RPAIN-217ENST00000575711 SETQ01105 290 aaPredicted RBP15.9■□□□□ 0.14
RPAIN-217ENST00000575711 LETM2Q2VYF4 491 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 DUSP28Q4G0W2 176 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 MOXD1Q6UVY6 613 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 NIPA1Q7RTP0 329 aa15.9■□□□□ 0.14
RPAIN-217ENST00000575711 FAM205CA6NFA0 338 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms