RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CDK8P49336 464 aa17.33■□□□□ 0.36
NUP88-207ENST00000573584 RASSF7Q02833 373 aa17.33■□□□□ 0.36
NUP88-207ENST00000573584 LRRC63Q05C16 580 aa17.33■□□□□ 0.36
NUP88-207ENST00000573584 GFPT1Q06210 699 aaPredicted RBP17.33■□□□□ 0.36
NUP88-207ENST00000573584 ORC2Q13416 577 aaPredicted RBP17.33■□□□□ 0.36
NUP88-207ENST00000573584 TPTE2Q6XPS3 522 aa17.33■□□□□ 0.36
NUP88-207ENST00000573584 TANGO6Q9C0B7 1094 aa17.33■□□□□ 0.36
NUP88-207ENST00000573584 UBA5Q9GZZ9 404 aa17.33■□□□□ 0.36
NUP88-207ENST00000573584 STIM2Q9P246 746 aa17.33■□□□□ 0.36
NUP88-207ENST00000573584 SRP68Q9UHB9 627 aaKnown RBP17.33■□□□□ 0.36
NUP88-207ENST00000573584 CCDC88AQ3V6T2 1871 aa17.33■□□□□ 0.36
NUP88-207ENST00000573584 TMEM266Q2M3C6 531 aa17.32■□□□□ 0.36
NUP88-207ENST00000573584 PJA2O43164 708 aa17.32■□□□□ 0.36
NUP88-207ENST00000573584 LDHCP07864 332 aa17.32■□□□□ 0.36
NUP88-207ENST00000573584 TM4SF1P30408 202 aa17.32■□□□□ 0.36
NUP88-207ENST00000573584 IRAK1P51617 712 aa17.32■□□□□ 0.36
NUP88-207ENST00000573584 NAP1L1P55209 391 aaKnown RBP17.32■□□□□ 0.36
NUP88-207ENST00000573584 NEDD1Q8NHV4 660 aa17.32■□□□□ 0.36
NUP88-207ENST00000573584 FXR2P51116 673 aaKnown RBP eCLIP17.31■□□□□ 0.36
NUP88-207ENST00000573584 EPHB4P54760 987 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 LRRC41Q15345 812 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 HAUS3Q68CZ6 603 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 LRRC55Q6ZSA7 311 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 CCDC155Q8N6L0 562 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 NOX5Q96PH1 765 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 TLR10Q9BXR5 811 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 MYH1P12882 1939 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 POTEMA6NI47 508 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 BUB1O43683 1085 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 SLC37A4O43826 429 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 PPFIA1Q13136 1202 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 ASTE1Q2TB18 679 aaPredicted RBP17.31■□□□□ 0.36
NUP88-207ENST00000573584 PDXDC1Q6P996 788 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 EMBQ6PCB8 327 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 DDX12PQ92771 950 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 MTMR8Q96EF0 704 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 CEP95Q96GE4 821 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 RAB34Q9BZG1 259 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 NARFQ9UHQ1 456 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 MAST2Q6P0Q8 1798 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 GOLGA8KD6RF30 607 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 OPA1O60313 960 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 SMARCA1P28370 1054 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 SLC1A4P43007 532 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 TDRD12Q587J7 1177 aaKnown RBP17.31■□□□□ 0.36
NUP88-207ENST00000573584 C8orf74Q6P047 294 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 C16orf86Q6ZW13 317 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 GLIS3Q8NEA6 775 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 RAD54LQ92698 747 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 TSG101Q99816 390 aa17.31■□□□□ 0.36
NUP88-207ENST00000573584 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 TDP2O95551 362 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 KLHDC7AQ5VTJ3 777 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 KRT79Q5XKE5 535 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 SLC51AQ86UW1 340 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 SNX29Q8TEQ0 813 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 SH3GL2Q99962 352 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 CAPS2Q9BXY5 557 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 EDEM3Q9BZQ6 932 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 RBM12Q9NTZ6 932 aaKnown RBP17.3■□□□□ 0.36
NUP88-207ENST00000573584 WNK3Q9BYP7 1800 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 SSU72P8A0A1W2PR75 194 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 ESYT2A0FGR8 921 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 HGSNATQ68CP4 663 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 RNF10Q8N5U6 811 aaKnown RBP17.3■□□□□ 0.36
NUP88-207ENST00000573584 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
NUP88-207ENST00000573584 NLRC4Q9NPP4 1024 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 RIC8AQ9NPQ8 531 aa17.3■□□□□ 0.36
NUP88-207ENST00000573584 COL16A1Q07092 1604 aaPredicted RBP17.29■□□□□ 0.36
NUP88-207ENST00000573584 RGL2O15211 777 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 ZPR1O75312 459 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 BTDP43251 543 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 PDIA5Q14554 519 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 CFAP221Q4G0U5 840 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 ALS2CLQ60I27 953 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 TSEN2Q8NCE0 465 aaKnown RBP17.29■□□□□ 0.36
NUP88-207ENST00000573584 PPM1EQ8WY54 764 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 MS4A14Q96JA4 679 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 RUFY1Q96T51 708 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 KCNMA1Q12791 1236 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 PSMD2Q13200 908 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 KCNK18Q7Z418 384 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 COA7Q96BR5 231 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 LRRC27Q9C0I9 530 aa17.29■□□□□ 0.36
NUP88-207ENST00000573584 HSF2BPO75031 334 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 SLC9C1Q4G0N8 1177 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 GBP6Q6ZN66 633 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 TEX11Q8IYF3 940 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 TSKSQ9UJT2 592 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 LEMD3Q9Y2U8 911 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 SNED1Q8TER0 1413 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 STRCQ7RTU9 1775 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 CCT5P48643 541 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 ADCY7P51828 1080 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 FKBP3Q00688 224 aaKnown RBP17.28■□□□□ 0.36
NUP88-207ENST00000573584 EHHADHQ08426 723 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
NUP88-207ENST00000573584 MYOCDQ8IZQ8 938 aa17.28■□□□□ 0.36
NUP88-207ENST00000573584 CAVIN3Q969G5 261 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms