RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 MTG1Q9BT17 334 aaPredicted RBP20.06■□□□□ 0.8
SMG6-212ENST00000573153 SEZ6LQ9BYH1 1024 aa20.06■□□□□ 0.8
SMG6-212ENST00000573153 TRMT13Q9NUP7 481 aaKnown RBP20.06■□□□□ 0.8
SMG6-212ENST00000573153 MEIS2O14770 477 aa20.05■□□□□ 0.8
SMG6-212ENST00000573153 MYL3P08590 195 aa20.05■□□□□ 0.8
SMG6-212ENST00000573153 MRPS9P82933 396 aaKnown RBP20.05■□□□□ 0.8
SMG6-212ENST00000573153 FUT2Q10981 343 aa20.05■□□□□ 0.8
SMG6-212ENST00000573153 RNF20Q5VTR2 975 aa20.05■□□□□ 0.8
SMG6-212ENST00000573153 ZFP91Q96JP5 570 aaPredicted RBP20.05■□□□□ 0.8
SMG6-212ENST00000573153 TCEANC2Q96MN5 208 aa20.05■□□□□ 0.8
SMG6-212ENST00000573153 B4DLN1 442 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 TLR3O15455 904 aaKnown RBP20.04■□□□□ 0.8
SMG6-212ENST00000573153 NEFLP07196 543 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 MRPL12P52815 198 aaKnown RBP20.04■□□□□ 0.8
SMG6-212ENST00000573153 SMAD3P84022 425 aaKnown RBP20.04■□□□□ 0.8
SMG6-212ENST00000573153 SP2Q02086 613 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 TRAF1Q13077 416 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 SEMA3FQ13275 785 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 NBPF20Q3BBV1 942 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 ERICH6BQ5W0A0 696 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 TMTC3Q6ZXV5 915 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 PIBF1Q8WXW3 757 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 TTYH1Q9H313 450 aaPredicted RBP20.04■□□□□ 0.8
SMG6-212ENST00000573153 BCAS3Q9H6U6 928 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 BRPF3Q9ULD4 1205 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 TANC1Q9C0D5 1861 aa20.04■□□□□ 0.8
SMG6-212ENST00000573153 GCOM1H8Y6P7 765 aaPredicted RBP20.03■□□□□ 0.8
SMG6-212ENST00000573153 RBAK-RBAKDNI3L0D1 243 aa20.03■□□□□ 0.8
SMG6-212ENST00000573153 GH1P01241 217 aa20.03■□□□□ 0.8
SMG6-212ENST00000573153 POLR2MP0CAP2 368 aa20.03■□□□□ 0.8
SMG6-212ENST00000573153 CYP2C9P11712 490 aa20.03■□□□□ 0.8
SMG6-212ENST00000573153 APOA5Q6Q788 366 aa20.03■□□□□ 0.8
SMG6-212ENST00000573153 CTCFLQ8NI51 663 aaPredicted RBP20.03■□□□□ 0.8
SMG6-212ENST00000573153 RNPC3Q96LT9 517 aaKnown RBP20.03■□□□□ 0.8
SMG6-212ENST00000573153 NEK1Q96PY6 1258 aa20.03■□□□□ 0.8
SMG6-212ENST00000573153 HIPK3Q9H422 1215 aa20.03■□□□□ 0.8
SMG6-212ENST00000573153 FAM217BQ9NTX9 383 aaPredicted RBP20.03■□□□□ 0.8
SMG6-212ENST00000573153 CNTNAP5Q8WYK1 1306 aa20.02■□□□□ 0.8
SMG6-212ENST00000573153 HAS3O00219 553 aa20.02■□□□□ 0.8
SMG6-212ENST00000573153 PIK3CDO00329 1044 aa20.02■□□□□ 0.8
SMG6-212ENST00000573153 ACRP10323 421 aa20.02■□□□□ 0.8
SMG6-212ENST00000573153 UBA1P22314 1058 aaKnown RBP20.02■□□□□ 0.8
SMG6-212ENST00000573153 KIF5BP33176 963 aa20.02■□□□□ 0.8
SMG6-212ENST00000573153 NFRKBQ6P4R8 1299 aa20.02■□□□□ 0.8
SMG6-212ENST00000573153 INPP4AQ96PE3 977 aaPredicted RBP20.02■□□□□ 0.8
SMG6-212ENST00000573153 CCDC69A6NI79 296 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 KPNA6O60684 536 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 PPIGQ13427 754 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMG6-212ENST00000573153 MYSM1Q5VVJ2 828 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 TYW1BQ6NUM6 668 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 USP17L6PQ6QN14 398 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 ZNF365Q70YC5 407 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 SESTD1Q86VW0 696 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 FCHSD1Q86WN1 690 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 FANCBQ8NB91 859 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 LZTS2Q9BRK4 669 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 IL23AQ9NPF7 189 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 CXXC1Q9P0U4 656 aaPredicted RBP20.01■□□□□ 0.79
SMG6-212ENST00000573153 SCN5AQ14524 2016 aa20.01■□□□□ 0.79
SMG6-212ENST00000573153 CHD9Q3L8U1 2897 aa20■□□□□ 0.79
SMG6-212ENST00000573153 hCG_1642624A0A1W2PR95 340 aa20■□□□□ 0.79
SMG6-212ENST00000573153 F2P00734 622 aa20■□□□□ 0.79
SMG6-212ENST00000573153 MYCLP12524 364 aaPredicted RBP20■□□□□ 0.79
SMG6-212ENST00000573153 ICAM3P32942 547 aa20■□□□□ 0.79
SMG6-212ENST00000573153 HSPA4P34932 840 aa20■□□□□ 0.79
SMG6-212ENST00000573153 CCL23P55773 120 aa20■□□□□ 0.79
SMG6-212ENST00000573153 HIC1Q14526 733 aa20■□□□□ 0.79
SMG6-212ENST00000573153 HSDL1Q3SXM5 330 aa20■□□□□ 0.79
SMG6-212ENST00000573153 DHX32Q7L7V1 743 aaKnown RBP20■□□□□ 0.79
SMG6-212ENST00000573153 TMEM199Q8N511 208 aa20■□□□□ 0.79
SMG6-212ENST00000573153 PPTC7Q8NI37 304 aa20■□□□□ 0.79
SMG6-212ENST00000573153 DHX38Q92620 1227 aaKnown RBP20■□□□□ 0.79
SMG6-212ENST00000573153 RRP36Q96EU6 259 aaKnown RBP20■□□□□ 0.79
SMG6-212ENST00000573153 STXBP5LQ9Y2K9 1186 aa20■□□□□ 0.79
SMG6-212ENST00000573153 TELO2Q9Y4R8 837 aa20■□□□□ 0.79
SMG6-212ENST00000573153 SLC12A7Q9Y666 1083 aa20■□□□□ 0.79
SMG6-212ENST00000573153 MRVI1Q9Y6F6 885 aa20■□□□□ 0.79
SMG6-212ENST00000573153 EYSQ5T1H1 3165 aa20■□□□□ 0.79
SMG6-212ENST00000573153 CALM1P0DP23 149 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 CALM2P0DP24 149 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 CALM3P0DP25 149 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 CPA1P15085 419 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 GNAQP50148 359 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 PTPN11Q06124 597 aaPredicted RBP19.99■□□□□ 0.79
SMG6-212ENST00000573153 KRT32Q14532 448 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 GPNMBQ14956 572 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 CELF3Q5SZQ8 465 aaKnown RBP19.99■□□□□ 0.79
SMG6-212ENST00000573153 NFXL1Q6ZNB6 911 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 MICU3Q86XE3 530 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 HERVK_113Q902F9 699 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 SCLYQ96I15 445 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 MYH7BA7E2Y1 1941 aa19.99■□□□□ 0.79
SMG6-212ENST00000573153 CDC27P30260 824 aa19.98■□□□□ 0.79
SMG6-212ENST00000573153 GDF6Q6KF10 455 aaPredicted RBP19.98■□□□□ 0.79
SMG6-212ENST00000573153 SNX14Q9Y5W7 946 aa19.98■□□□□ 0.79
SMG6-212ENST00000573153 DOCK5Q9H7D0 1870 aa19.98■□□□□ 0.79
SMG6-212ENST00000573153 NID2Q14112 1375 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 GRXCR1A8MXD5 290 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 EPB41L2O43491 1005 aaKnown RBP19.97■□□□□ 0.79
SMG6-212ENST00000573153 GGPS1O95749 300 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms