RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 FBXO11Q86XK2 927 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 HOMER1Q86YM7 354 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 DNERQ8NFT8 737 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 PPP1R13LQ8WUF5 828 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 TBC1D5Q92609 795 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 COPS5Q92905 334 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 GTF3C6Q969F1 213 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 JMJD4Q9H9V9 463 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 MTMR10Q9NXD2 777 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 MAD2L2Q9UI95 211 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 TPCN1Q9ULQ1 816 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 DOCK5Q9H7D0 1870 aa13.65□□□□□ -0.22
NDE1-206ENST00000572967 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 MYH7BA7E2Y1 1941 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
NDE1-206ENST00000572967 LOC102724159A0A0B4J2E5 919 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 CABYRO75952 493 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 ARIH2O95376 493 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 TIMP1P01033 207 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 HMGN5P82970 282 aaKnown RBP13.64□□□□□ -0.23
NDE1-206ENST00000572967 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
NDE1-206ENST00000572967 TRAF1Q13077 416 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 PWP2Q15269 919 aaKnown RBP13.64□□□□□ -0.23
NDE1-206ENST00000572967 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
NDE1-206ENST00000572967 GUCD1Q96NT3 240 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 LLPHQ9BRT6 129 aaKnown RBP13.64□□□□□ -0.23
NDE1-206ENST00000572967 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
NDE1-206ENST00000572967 BRPF3Q9ULD4 1205 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 Q9Y3F1 56 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
NDE1-206ENST00000572967 KLRF2D3W0D1 207 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 PPP1R11O60927 126 aaPredicted RBP13.63□□□□□ -0.23
NDE1-206ENST00000572967 CFBP00751 764 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 CD4P01730 458 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 ACRP10323 421 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 CSF2RAP15509 400 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 EIF2AK2P19525 551 aaKnown RBP13.63□□□□□ -0.23
NDE1-206ENST00000572967 SMARCA1P28370 1054 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 CYP2C18P33260 490 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 CPT1AP50416 773 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 MFSD5Q6N075 450 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 SEPT14Q6ZU15 432 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 SCFD2Q8WU76 684 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 WASF1Q92558 559 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
NDE1-206ENST00000572967 TAAR1Q96RJ0 339 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.63□□□□□ -0.232e-9■□□□□ 9
NDE1-206ENST00000572967 HIPK3Q9H422 1215 aa13.63□□□□□ -0.23
NDE1-206ENST00000572967 MRPL11Q9Y3B7 192 aaKnown RBP13.63□□□□□ -0.23
NDE1-206ENST00000572967 RBM47A0AV96 593 aaKnown RBP13.62□□□□□ -0.23
NDE1-206ENST00000572967 OPLAHO14841 1288 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 TXNP10599 105 aaKnown RBP13.62□□□□□ -0.23
NDE1-206ENST00000572967 PURAQ00577 322 aaKnown RBP13.62□□□□□ -0.23
NDE1-206ENST00000572967 STK3Q13188 491 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 PPIGQ13427 754 aaKnown RBP eCLIP13.62□□□□□ -0.233e-7■□□□□ 10.4
NDE1-206ENST00000572967 COL9A3Q14050 684 aaPredicted RBP13.62□□□□□ -0.23
NDE1-206ENST00000572967 TTLL4Q14679 1199 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 ME3Q16798 604 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 TMTC3Q6ZXV5 915 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 SLC43A3Q8NBI5 491 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 MYL10Q9BUA6 226 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 AMNQ9BXJ7 453 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 TRPV6Q9H1D0 765 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 POLR3EQ9NVU0 708 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 SEC63Q9UGP8 760 aaKnown RBP13.62□□□□□ -0.23
NDE1-206ENST00000572967 STXBP5LQ9Y2K9 1186 aa13.62□□□□□ -0.23
NDE1-206ENST00000572967 PALM3A6NDB9 673 aaPredicted RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 B4DLN1 442 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 ZBTB5O15062 677 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 NKRFO15226 690 aaKnown RBP eCLIP13.61□□□□□ -0.23
NDE1-206ENST00000572967 CD2BP2O95400 341 aaKnown RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 HOXA13P31271 388 aaPredicted RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 MRPL12P52815 198 aaKnown RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 CCL23P55773 120 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 SMAD3P84022 425 aaKnown RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 FAM47CQ5HY64 1035 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 ARHGEF16Q5VV41 709 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 FAM109BQ6ICB4 259 aaPredicted RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 MCF2L2Q86YR7 1114 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 NSUN6Q8TEA1 469 aaKnown RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 PIGSQ96S52 555 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 RMDN3Q96TC7 470 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 MTG1Q9BT17 334 aaPredicted RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 WNT8AQ9H1J5 351 aa13.61□□□□□ -0.23
NDE1-206ENST00000572967 TRMT13Q9NUP7 481 aaKnown RBP13.61□□□□□ -0.23
NDE1-206ENST00000572967 CYTH3O43739 400 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 IFNAR1P17181 557 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 XBP1P17861 261 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 RXRAP19793 462 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms