RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 EIF3JO75822 258 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 CXCL10P02778 98 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 WDR5P61964 334 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 RBL2Q08999 1139 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 GRB10Q13322 594 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 DGKDQ16760 1214 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 ASPRV1Q53RT3 343 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 CNKSR3Q6P9H4 555 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 LRRC8DQ7L1W4 858 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 CHST3Q7LGC8 479 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 HLA-CQ95604 372 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 CRBNQ96SW2 442 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 ZSCAN10Q96SZ4 725 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 LNPKQ9C0E8 428 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 GTF2IRD1Q9UHL9 959 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 DDX41Q9UJV9 622 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 MRPL11Q9Y3B7 192 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 TRANK1O15050 2925 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 LPXNO60711 386 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 CKBP12277 381 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 LAMC2Q13753 1193 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 QRICH1Q2TAL8 776 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 ARHGEF16Q5VV41 709 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 FBXO11Q86XK2 927 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 C7orf31Q8N865 590 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 KATNAL1Q9BW62 490 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 JMJD4Q9H9V9 463 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 LMCD1Q9NZU5 365 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 HDAC6Q9UBN7 1215 aa11.52□□□□□ -0.57
TRAPPC1-205ENST00000572656 ABHD14A-ACY1A0A1B0GW23 586 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 LCHNA4D1U4 455 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 B4E1Z4 1266 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 DHX16O60231 1041 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 NBNO60934 754 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 EFCAB14O75071 495 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 F2P00734 622 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 NR3C2P08235 984 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 EIF2AK2P19525 551 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 PSEN2P49810 448 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 DEFB103AP81534 67 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 PTK7Q13308 1070 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 MFSD10Q14728 455 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 SPRED2Q7Z698 418 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 TMCO2Q7Z6W1 182 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 ENAHQ8N8S7 591 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 PPTC7Q8NI37 304 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 RAD9AQ99638 391 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 ALG1Q9BT22 464 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 VAT1LQ9HCJ6 419 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 PXMP2Q9NR77 195 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 ZSWIM5Q9P217 1185 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 MRVI1Q9Y6F6 885 aa11.51□□□□□ -0.57
TRAPPC1-205ENST00000572656 SCN10AQ9Y5Y9 1956 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 HAS3O00219 553 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 PPFIA4O75335 1185 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 GJB5O95377 273 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 CFBP00751 764 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 HOXD8P13378 290 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 PLA2G5P39877 138 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 HSD17B4P51659 736 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 AAMPQ13685 434 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 IKBKEQ14164 716 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 KIAA0753Q2KHM9 967 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 TCTN1Q2MV58 587 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 TRIM71Q2Q1W2 868 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 TRAF7Q6Q0C0 670 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 CWC27Q6UX04 472 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 SMC5Q8IY18 1101 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 AMNQ9BXJ7 453 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 KRT23Q9C075 422 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 OSBPL3Q9H4L5 887 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 DIAPH3Q9NSV4 1193 aa11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 MAP3K20Q9NYL2 800 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-205ENST00000572656 OPLAHO14841 1288 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 ZNF286BP0CG31 522 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 ERVK-21P61565 698 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 GHRHRQ02643 423 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 IMMTQ16891 758 aaKnown RBP11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 ZNF618Q5T7W0 954 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 MYSM1Q5VVJ2 828 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 B4GALNT3Q6L9W6 998 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 KCNV1Q6PIU1 500 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 STOX1Q6ZVD7 989 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 VSIG10LQ86VR7 867 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 PLEKHM2Q8IWE5 1019 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 GDPD5Q8WTR4 605 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 FAM122AQ96E09 287 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 TGS1Q96RS0 853 aaKnown RBP11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 PDCD2LQ9BRP1 358 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 UBAC1Q9BSL1 405 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 DSCC1Q9BVC3 393 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 RWDD1Q9H446 243 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 CNNM2Q9H8M5 875 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 CTNNA3Q9UI47 895 aa11.49□□□□□ -0.57
TRAPPC1-205ENST00000572656 REV3LO60673 3130 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms