RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 TSPY8P0CW00 308 aa12□□□□□ -0.49
CHMP6-203ENST00000572525 PDE4BQ07343 736 aa12□□□□□ -0.49
CHMP6-203ENST00000572525 PTK7Q13308 1070 aa12□□□□□ -0.49
CHMP6-203ENST00000572525 EPC2Q52LR7 807 aa12□□□□□ -0.49
CHMP6-203ENST00000572525 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
CHMP6-203ENST00000572525 TMCO2Q7Z6W1 182 aaPredicted RBP12□□□□□ -0.49
CHMP6-203ENST00000572525 KIAA1671Q9BY89 1806 aa12□□□□□ -0.49
CHMP6-203ENST00000572525 CACNA1BQ00975 2339 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 HMMRO75330 724 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 LGR5O75473 907 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 AMHP03971 560 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 ZFYP08048 801 aaPredicted RBP11.99□□□□□ -0.49
CHMP6-203ENST00000572525 MCCP23508 829 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 LTBRP36941 435 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 NOVP48745 357 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 NUBP1P53384 320 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 PDE4DQ08499 809 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 TRIM71Q2Q1W2 868 aaKnown RBP11.99□□□□□ -0.49
CHMP6-203ENST00000572525 TCEAL5Q5H9L2 206 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 CCDC62Q6P9F0 684 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 APPBP2Q92624 585 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 ANP32EQ9BTT0 268 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 KATNAL1Q9BW62 490 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 EPB41L4AQ9HCS5 686 aaPredicted RBP11.99□□□□□ -0.49
CHMP6-203ENST00000572525 WDR19Q8NEZ3 1342 aa11.99□□□□□ -0.49
CHMP6-203ENST00000572525 DMXL1Q9Y485 3027 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 C5orf67F2Z3F1 127 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 MBTPS2O43462 519 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 CHGBP05060 677 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 SLC3A2P08195 630 aaKnown RBP11.98□□□□□ -0.49
CHMP6-203ENST00000572525 MMP3P08254 477 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 TXNP10599 105 aaKnown RBP11.98□□□□□ -0.49
CHMP6-203ENST00000572525 RLBP1P12271 317 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 TCF15Q12870 199 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 SMAD4Q13485 552 aaKnown RBP11.98□□□□□ -0.49
CHMP6-203ENST00000572525 GPM6BQ13491 265 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 TCTN1Q2MV58 587 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 RPAINQ86UA6 219 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 FBXO11Q86XK2 927 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 RNF135Q8IUD6 432 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 RGS22Q8NE09 1264 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 KAT2BQ92831 832 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 EMID1Q96A84 441 aaPredicted RBP11.98□□□□□ -0.49
CHMP6-203ENST00000572525 PURBQ96QR8 312 aaKnown RBP11.98□□□□□ -0.49
CHMP6-203ENST00000572525 MUTYHQ9UIF7 546 aa11.98□□□□□ -0.49
CHMP6-203ENST00000572525 PROB1E7EW31 1015 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 HAS3O00219 553 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 NFIBO00712 420 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 GPAA1O43292 621 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 GFRA3O60609 400 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 PRDM1O75626 825 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 F2P00734 622 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 GH1P01241 217 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 RB1P06400 928 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 CASTP20810 708 aaKnown RBP11.97□□□□□ -0.49
CHMP6-203ENST00000572525 TDO2P48775 406 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 TFAP4Q01664 338 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 MBTPS1Q14703 1052 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 PLEKHG4Q58EX7 1191 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 ERICH6BQ5W0A0 696 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 RNF207Q6ZRF8 634 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 TRIM67Q6ZTA4 783 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 KCTD1Q719H9 257 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 SUGP1Q8IWZ8 645 aaKnown RBP11.97□□□□□ -0.49
CHMP6-203ENST00000572525 TMEM192Q8IY95 271 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 FBXL6Q8N531 539 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 KBTBD3Q8NAB2 608 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 CLEC4DQ8WXI8 215 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 OSBP2Q969R2 916 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 CLDND1Q9NY35 253 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 ISY1Q9ULR0 285 aaKnown RBP11.97□□□□□ -0.49
CHMP6-203ENST00000572525 RWDD3Q9Y3V2 267 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 MYO10Q9HD67 2058 aa11.97□□□□□ -0.49
CHMP6-203ENST00000572525 PTPDC1A2A3K4 754 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 TMEM221A6NGB7 291 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 PATL2C9JE40 543 aaKnown RBP11.96□□□□□ -0.49
CHMP6-203ENST00000572525 M0R296 226 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 ARIH2O95376 493 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 EYA4O95677 639 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 NEFLP07196 543 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 HOXD8P13378 290 aaPredicted RBP11.96□□□□□ -0.49
CHMP6-203ENST00000572525 RPS6P62753 249 aaKnown RBP11.96□□□□□ -0.49
CHMP6-203ENST00000572525 ARHGAP1Q07960 439 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 CBX2Q14781 532 aaPredicted RBP11.96□□□□□ -0.49
CHMP6-203ENST00000572525 DGKDQ16760 1214 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 ZNF618Q5T7W0 954 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 SLC30A10Q6XR72 485 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 ERMP1Q7Z2K6 904 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 MYOCDQ8IZQ8 938 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 COPS5Q92905 334 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 TOP1MTQ969P6 601 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 NACAP1Q9BZK3 213 aa11.96□□□□□ -0.49
CHMP6-203ENST00000572525 ALG13Q9NP73 1137 aaKnown RBP11.96□□□□□ -0.49
CHMP6-203ENST00000572525 EPG5Q9HCE0 2579 aa11.95□□□□□ -0.5
CHMP6-203ENST00000572525 CAND2O75155 1236 aa11.95□□□□□ -0.5
CHMP6-203ENST00000572525 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
CHMP6-203ENST00000572525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP6-203ENST00000572525 IFNL3Q8IZI9 196 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms