RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TMTC2Q8N394 836 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 CTCFLQ8NI51 663 aaPredicted RBP10.06□□□□□ -0.8
SMG6-210ENST00000572205 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
SMG6-210ENST00000572205 BRF1Q92994 677 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 KIF2CQ99661 725 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 FAM184BQ9ULE4 1060 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 MRPL11Q9Y3B7 192 aaKnown RBP10.06□□□□□ -0.8
SMG6-210ENST00000572205 SLC12A7Q9Y666 1083 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 ZBTB43O43298 467 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
SMG6-210ENST00000572205 CALM1P0DP23 149 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 CALM2P0DP24 149 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 CALM3P0DP25 149 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
SMG6-210ENST00000572205 ITGB8P26012 769 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 KIF5BP33176 963 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 ACLYP53396 1101 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 BEX3Q00994 111 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 ARHGAP1Q07960 439 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 PGM5Q15124 567 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 BLOC1S2Q6QNY1 142 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 RUFY3Q7L099 469 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 SLC43A3Q8NBI5 491 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 COPS5Q92905 334 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 ARID3AQ99856 593 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 GDF15Q99988 308 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 LZTS2Q9BRK4 669 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 TSEN34Q9BSV6 310 aaKnown RBP10.05□□□□□ -0.8
SMG6-210ENST00000572205 HTATIP2Q9BUP3 242 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 UPF3BQ9BZI7 483 aaKnown RBP10.05□□□□□ -0.8
SMG6-210ENST00000572205 PDLIM7Q9NR12 457 aa10.05□□□□□ -0.8
SMG6-210ENST00000572205 ADD3Q9UEY8 706 aaKnown RBP10.05□□□□□ -0.8
SMG6-210ENST00000572205 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 GOLGA8AA7E2F4 631 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 GOLGA8BA8MQT2 603 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 STXBP3O00186 592 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 EDIL3O43854 480 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 DHX16O60231 1041 aaKnown RBP10.04□□□□□ -0.8
SMG6-210ENST00000572205 CFBP00751 764 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 ASGR1P07306 291 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 EIF2AK2P19525 551 aaKnown RBP10.04□□□□□ -0.8
SMG6-210ENST00000572205 PDIA3P30101 505 aaKnown RBP10.04□□□□□ -0.8
SMG6-210ENST00000572205 ADD1P35611 737 aaKnown RBP10.04□□□□□ -0.8
SMG6-210ENST00000572205 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
SMG6-210ENST00000572205 CDK7P50613 346 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 RTP1P59025 263 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 TNFAIP2Q03169 654 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 DSG2Q14126 1118 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 NPY5RQ15761 445 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 KCNA10Q16322 511 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 RTN1Q16799 776 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 TRIM60Q495X7 471 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 SLC39A5Q6ZMH5 540 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 NFXL1Q6ZNB6 911 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 SH3RF1Q7Z6J0 888 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 C7orf61Q8IZ16 206 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 SAMD3Q8N6K7 520 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 ARRDC4Q8NCT1 418 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 CRYGNQ8WXF5 182 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 PIBF1Q8WXW3 757 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 CTAGE1Q96RT6 745 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 RMDN3Q96TC7 470 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
SMG6-210ENST00000572205 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
SMG6-210ENST00000572205 Q9Y3F1 56 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 TELO2Q9Y4R8 837 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 PRUNE2Q8WUY3 3088 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 TET1Q8NFU7 2136 aa10.04□□□□□ -0.8
SMG6-210ENST00000572205 A6NJR5 290 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 KBTBD13C9JR72 458 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 RBAK-RBAKDNI3L0D1 243 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 LARGE1O95461 756 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 NR3C2P08235 984 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 C6orf222P0C671 652 aaPredicted RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 GNAQP50148 359 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 ANAPC15P60006 121 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 SP2Q02086 613 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 FSCN1Q16658 493 aaKnown RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 UBE2SQ16763 222 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 IQSEC1Q6DN90 963 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 ANKRD33Q7Z3H0 272 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 RNF180Q86T96 592 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 VSIG10LQ86VR7 867 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 MCF2L2Q86YR7 1114 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 EMID1Q96A84 441 aaPredicted RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 FERMT2Q96AC1 680 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 RRP36Q96EU6 259 aaKnown RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 INPP4AQ96PE3 977 aaPredicted RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 IWS1Q96ST2 819 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 WDR11Q9BZH6 1224 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 ALDH8A1Q9H2A2 487 aaPredicted RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 BCAS3Q9H6U6 928 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 NCOA5Q9HCD5 579 aaKnown RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 RBM28Q9NW13 759 aaKnown RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 TBX21Q9UL17 535 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 ZMYND8Q9ULU4 1186 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms